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      Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate

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          Abstract

          Root traits such as root angle and hair length influence resource acquisition particularly for immobile nutrients like phosphorus (P). Here, we attempted to modify root angle in rice by disrupting the OsAUX1 auxin influx transporter gene in an effort to improve rice P acquisition efficiency. We show by X-ray microCT imaging that root angle is altered in the osaux1 mutant, causing preferential foraging in the top soil where P normally accumulates, yet surprisingly, P acquisition efficiency does not improve. Through closer investigation, we reveal that OsAUX1 also promotes root hair elongation in response to P limitation. Reporter studies reveal that auxin response increases in the root hair zone in low P environments. We demonstrate that OsAUX1 functions to mobilize auxin from the root apex to the differentiation zone where this signal promotes hair elongation when roots encounter low external P. We conclude that auxin and OsAUX1 play key roles in promoting root foraging for P in rice.

          Abstract

          Plant root architecture can adapt to different nutrient conditions in the soil. Here Giri et al. show that the rice auxin influx carrier AUX1 mobilizes auxin from the root apex to the differentiation zone and promotes root hair elongation when roots encounter low external phosphate.

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          Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions.

          The genetic improvement of drought resistance is essential for stable and adequate crop production in drought-prone areas. Here we demonstrate that alteration of root system architecture improves drought avoidance through the cloning and characterization of DEEPER ROOTING 1 (DRO1), a rice quantitative trait locus controlling root growth angle. DRO1 is negatively regulated by auxin and is involved in cell elongation in the root tip that causes asymmetric root growth and downward bending of the root in response to gravity. Higher expression of DRO1 increases the root growth angle, whereby roots grow in a more downward direction. Introducing DRO1 into a shallow-rooting rice cultivar by backcrossing enabled the resulting line to avoid drought by increasing deep rooting, which maintained high yield performance under drought conditions relative to the recipient cultivar. Our experiments suggest that control of root system architecture will contribute to drought avoidance in crops.
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            Root phenes for enhanced soil exploration and phosphorus acquisition: tools for future crops.

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              Arabidopsis AUX1 gene: a permease-like regulator of root gravitropism.

              The plant hormone auxin regulates various developmental processes including root formation, vascular development, and gravitropism. Mutations within the AUX1 gene confer an auxin-resistant root growth phenotype and abolish root gravitropic curvature. Polypeptide sequence similarity to amino acid permeases suggests that AUX1 mediates the transport of an amino acid-like signaling molecule. Indole-3-acetic acid, the major form of auxin in higher plants, is structurally similar to tryptophan and is a likely substrate for the AUX1 gene product. The cloned AUX1 gene can restore the auxin-responsiveness of transgenic aux1 roots. Spatially, AUX1 is expressed in root apical tissues that regulate root gravitropic curvature.
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                Author and article information

                Contributors
                malcolm.bennett@nottingham.ac.uk
                Journal
                Nat Commun
                Nat Commun
                Nature Communications
                Nature Publishing Group UK (London )
                2041-1723
                12 April 2018
                12 April 2018
                2018
                : 9
                : 1408
                Affiliations
                [1 ]ISNI 0000 0004 1936 8868, GRID grid.4563.4, Centre for Plant Integrative Biology (CPIB), School of Biosciences, , University of Nottingham, ; Nottingham, LE12 5RD UK
                [2 ]ISNI 0000 0001 2217 5846, GRID grid.419632.b, National Institute of Plant Genome Research (NIPGR), ; New Delhi, India
                [3 ]ISNI 0000 0004 0368 8293, GRID grid.16821.3c, State Key Laboratory of Hybrid Rice, , Shanghai Jiao Tong University, ; Shanghai, China
                [4 ]ISNI 0000 0001 2153 9871, GRID grid.8183.2, CIRAD, UMR AGAP, ; F34398 Montpellier, Cedex 5 France
                [5 ]ISNI 0000 0000 8578 2742, GRID grid.6341.0, Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, , Swedish University of Agricultural Sciences, ; SE-901 83 Umeå, Sweden
                [6 ]ISNI 0000 0004 1936 7291, GRID grid.7107.1, Institute of Biological and Environmental Sciences, , University of Aberdeen, ; Aberdeen, AB24 2TZ UK
                [7 ]ISNI 0000 0001 2107 8171, GRID grid.452611.5, Japan International Center for Agricultural Sciences (JIRCAS), ; 1-1 Ohwashi, Tsukuba, Ibaraki 305-8686 Japan
                [8 ]ISNI 0000 0004 1936 8868, GRID grid.4563.4, School of Computer Science, , University of Nottingham, ; Jubilee Campus, Nottingham, NG8 1BB UK
                [9 ]ISNI 0000 0001 1014 6626, GRID grid.43641.34, Ecological Sciences, , The James Hutton Institute, ; Invergowrie, Dundee, DD2 5DA UK
                [10 ]ISNI 0000 0001 2227 9389, GRID grid.418374.d, Rothamsted Research, ; Harpenden, Hertfordshire, AL5 2JQ UK
                [11 ]ISNI 0000 0001 2097 4281, GRID grid.29857.31, Department of Plant Science, , The Pennsylvania State University, ; 102 Tyson Building, University Park, PA 16802 USA
                [12 ]ISNI 0000 0004 1936 7304, GRID grid.1010.0, University of Adelaide-SJTU Joint Centre for Agriculture and Health, , University of Adelaide, Waite Campus, ; Urrbrae, SA Australia
                [13 ]ISNI 0000000121532610, GRID grid.1031.3, Present Address: Southern Cross Plant Science, , Southern Cross University, ; Lismore, NSW 2480 Australia
                Author information
                http://orcid.org/0000-0001-6969-5187
                http://orcid.org/0000-0001-6515-4922
                http://orcid.org/0000-0002-6103-5704
                http://orcid.org/0000-0002-9614-1347
                http://orcid.org/0000-0001-5697-3707
                http://orcid.org/0000-0003-2901-189X
                http://orcid.org/0000-0002-9024-5348
                http://orcid.org/0000-0002-5333-8502
                http://orcid.org/0000-0001-8759-3969
                http://orcid.org/0000-0001-5862-8296
                http://orcid.org/0000-0002-7265-9790
                http://orcid.org/0000-0002-1764-2929
                http://orcid.org/0000-0003-0475-390X
                Article
                3850
                10.1038/s41467-018-03850-4
                5897452
                29650967
                b1d2edcb-1f46-416b-b0b1-1afb3d50b054
                © The Author(s) 2018

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 9 January 2017
                : 16 March 2018
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