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      Ecosystem multifunctionality and soil microbial communities in response to ecological restoration in an alpine degraded grassland

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          Abstract

          Linkages between microbial communities and multiple ecosystem functions are context-dependent. However, the impacts of different restoration measures on microbial communities and ecosystem functioning remain unclear. Here, a 14-year long-term experiment was conducted using three restoration modes: planting mixed grasses (MG), planting shrub with Salix cupularis alone (SA), and planting shrub with Salix cupularis plus planting mixed grasses (SG), with an extremely degraded grassland serving as the control (CK). Our objective was to investigate how ecosystem multifunctionality and microbial communities (diversity, composition, and co-occurrence networks) respond to different restoration modes. Our results indicated that most of individual functions (i.e., soil nutrient contents, enzyme activities, and microbial biomass) in the SG treatment were significantly higher than in the CK treatment, and even higher than MG and SA treatments. Compared with the CK treatment, treatments MG, SA, and SG significantly increased the multifunctionality index on average by 0.57, 0.23 and 0.76, respectively. Random forest modeling showed that the alpha-diversity and composition of bacterial communities, rather than fungal communities, drove the ecosystem multifunctionality. Moreover, we found that both the MG and SG treatments significantly improved bacterial network stability, which exhabited stronger correlations with ecosystem multifunctionality compared to fungal network stability. In summary, this study demonstrates that planting shrub and grasses altogether is a promising restoration mode that can enhance ecosystem multifunctionality and improve microbial diversity and stability in the alpine degraded grassland.

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            Soils harbour some of the most diverse microbiomes on Earth and are essential for both nutrient cycling and carbon storage. To understand soil functioning, it is necessary to model the global distribution patterns and functional gene repertoires of soil microorganisms, as well as the biotic and environmental associations between the diversity and structure of both bacterial and fungal soil communities1-4. Here we show, by leveraging metagenomics and metabarcoding of global topsoil samples (189 sites, 7,560 subsamples), that bacterial, but not fungal, genetic diversity is highest in temperate habitats and that microbial gene composition varies more strongly with environmental variables than with geographic distance. We demonstrate that fungi and bacteria show global niche differentiation that is associated with contrasting diversity responses to precipitation and soil pH. Furthermore, we provide evidence for strong bacterial-fungal antagonism, inferred from antibiotic-resistance genes, in topsoil and ocean habitats, indicating the substantial role of biotic interactions in shaping microbial communities. Our results suggest that both competition and environmental filtering affect the abundance, composition and encoded gene functions of bacterial and fungal communities, indicating that the relative contributions of these microorganisms to global nutrient cycling varies spatially.
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                Author and article information

                Contributors
                Journal
                Front Plant Sci
                Front Plant Sci
                Front. Plant Sci.
                Frontiers in Plant Science
                Frontiers Media S.A.
                1664-462X
                01 August 2023
                2023
                : 14
                : 1173962
                Affiliations
                [1] 1 College of Resources, Sichuan Agricultural University , Chengdu, China
                [2] 2 Institute of Agricultural Bioenvironment and Energy, Chengdu Academy of Agriculture and Forestry Sciences , Chengdu, China
                [3] 3 Institute for Meteorology and Climate Research (IMK-IFU), Karlsruhe Institute of Technology , Garmisch-Partenkirchen, Germany
                [4] 4 State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences , Nanjing, China
                [5] 5 Department of Civil Engineering , The University of Hong Kong, Hong Kong SAR, China
                Author notes

                Edited by: Sergio Rossi, Université du Québecà Chicoutimi, Canada

                Reviewed by: Yan Ruirui, Chinese Academy of Agricultural Sciences (CAAS), China; Wangya Han, Nanjing University of Information Science and Technology, China

                *Correspondence: Yufu Hu, huyufu@ 123456sicau.edu.cn

                †These authors have contributed equally to this work

                Article
                10.3389/fpls.2023.1173962
                10431941
                bd41c2ac-e290-4d5a-8de4-1291db292659
                Copyright © 2023 Shu, Liu, Hu, Xia, Fan, Zhang, Zhang and Zhou

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 25 February 2023
                : 07 July 2023
                Page count
                Figures: 5, Tables: 2, Equations: 0, References: 71, Pages: 12, Words: 6145
                Funding
                This research was supported by the National Natural Science Foundation of China (41771552) and the Sichuan Science and Technology Program (2020JDRC0074, 2021JDRC0082).
                Categories
                Plant Science
                Original Research
                Custom metadata
                Functional Plant Ecology

                Plant science & Botany
                ecological restoration,multifunctionality,biodiversity,microbial stability,alpine grassland

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