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      HyperSLICE: HyperBand optimized spiral for low‐latency interactive cardiac examination

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          Abstract

          Purpose

          Interactive cardiac MRI is used for fast scan planning and MR‐guided interventions. However, the requirement for real‐time acquisition and near‐real‐time visualization constrains the achievable spatio‐temporal resolution. This study aims to improve interactive imaging resolution through optimization of undersampled spiral sampling and leveraging of deep learning for low‐latency reconstruction (deep artifact suppression).

          Methods

          A variable density spiral trajectory was parametrized and optimized via HyperBand to provide the best candidate trajectory for rapid deep artifact suppression. Training data consisted of 692 breath‐held CINEs. The developed interactive sequence was tested in simulations and prospectively in 13 subjects (10 for image evaluation, 2 during catheterization, 1 during exercise). In the prospective study, the optimized framework—HyperSLICE— was compared with conventional Cartesian real‐time and breath‐hold CINE imaging in terms quantitative and qualitative image metrics. Statistical differences were tested using Friedman chi‐squared tests with post hoc Nemenyi test ( p < 0.05).

          Results

          In simulations the normalized RMS error, peak SNR, structural similarity, and Laplacian energy were all statistically significantly higher using optimized spiral compared to radial and uniform spiral sampling, particularly after scan plan changes (structural similarity: 0.71 vs. 0.45 and 0.43). Prospectively, HyperSLICE enabled a higher spatial and temporal resolution than conventional Cartesian real‐time imaging. The pipeline was demonstrated in patients during catheter pull back, showing sufficiently fast reconstruction for interactive imaging.

          Conclusion

          HyperSLICE enables high spatial and temporal resolution interactive imaging. Optimizing the spiral sampling enabled better overall image quality and superior handling of image transitions compared with radial and uniform spiral trajectories.

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          Most cited references39

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          SciPy 1.0: fundamental algorithms for scientific computing in Python

          SciPy is an open-source scientific computing library for the Python programming language. Since its initial release in 2001, SciPy has become a de facto standard for leveraging scientific algorithms in Python, with over 600 unique code contributors, thousands of dependent packages, over 100,000 dependent repositories and millions of downloads per year. In this work, we provide an overview of the capabilities and development practices of SciPy 1.0 and highlight some recent technical developments.
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            Sparse MRI: The application of compressed sensing for rapid MR imaging.

            The sparsity which is implicit in MR images is exploited to significantly undersample k-space. Some MR images such as angiograms are already sparse in the pixel representation; other, more complicated images have a sparse representation in some transform domain-for example, in terms of spatial finite-differences or their wavelet coefficients. According to the recently developed mathematical theory of compressed-sensing, images with a sparse representation can be recovered from randomly undersampled k-space data, provided an appropriate nonlinear recovery scheme is used. Intuitively, artifacts due to random undersampling add as noise-like interference. In the sparse transform domain the significant coefficients stand out above the interference. A nonlinear thresholding scheme can recover the sparse coefficients, effectively recovering the image itself. In this article, practical incoherent undersampling schemes are developed and analyzed by means of their aliasing interference. Incoherence is introduced by pseudo-random variable-density undersampling of phase-encodes. The reconstruction is performed by minimizing the l(1) norm of a transformed image, subject to data fidelity constraints. Examples demonstrate improved spatial resolution and accelerated acquisition for multislice fast spin-echo brain imaging and 3D contrast enhanced angiography. (c) 2007 Wiley-Liss, Inc.
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              Parallel imaging allows the reconstruction of images from undersampled multicoil data. The two main approaches are: SENSE, which explicitly uses coil sensitivities, and GRAPPA, which makes use of learned correlations in k-space. The purpose of this work is to clarify their relationship and to develop and evaluate an improved algorithm.
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                Author and article information

                Contributors
                o.jaubert@ucl.ac.uk
                Journal
                Magn Reson Med
                Magn Reson Med
                10.1002/(ISSN)1522-2594
                MRM
                Magnetic Resonance in Medicine
                John Wiley and Sons Inc. (Hoboken )
                0740-3194
                1522-2594
                06 October 2023
                January 2024
                : 91
                : 1 ( doiID: 10.1002/mrm.v91.1 )
                : 266-279
                Affiliations
                [ 1 ] UCL Center for Translational Cardiovascular Imaging University College London London UK
                [ 2 ] Department of Cardiology Royal Free London NHS Foundation Trust London UK
                [ 3 ] Department of Computer Science University College London London UK
                Author notes
                [*] [* ] Correspondence

                Olivier Jaubert, Center for Translational Cardiovascular Imaging, University College London, 30 Guilford St, London WC1N 1EH, UK.

                Email: o.jaubert@ 123456ucl.ac.uk

                Author information
                https://orcid.org/0000-0002-7854-4150
                https://orcid.org/0000-0002-9792-2022
                Article
                MRM29855
                10.1002/mrm.29855
                10953456
                37799087
                c6cd5a8b-d70d-4713-b91c-a10fa28a2709
                © 2023 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals LLC on behalf of International Society for Magnetic Resonance in Medicine.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                History
                : 15 August 2023
                : 22 March 2023
                : 15 August 2023
                Page count
                Figures: 6, Tables: 3, Pages: 14, Words: 6676
                Funding
                Funded by: British Heart Foundation , doi 10.13039/501100000274;
                Award ID: NH/18/1/33511
                Award ID: PG/17/6/32797
                Funded by: Heart Research UK , doi 10.13039/501100000327;
                Award ID: RG2661/17/20
                Funded by: UK Research and Innovation , doi 10.13039/100014013;
                Award ID: MR/S032290/1
                Categories
                Research Article
                Imaging Methodology
                Custom metadata
                2.0
                January 2024
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.3.9 mode:remove_FC converted:20.03.2024

                Radiology & Imaging
                cardiac mri,deep learning,image reconstruction,interventional,real‐time
                Radiology & Imaging
                cardiac mri, deep learning, image reconstruction, interventional, real‐time

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