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      Age and Infectious Dose Significantly Affect Disease Progression after RHDV2 Infection in Naïve Domestic Rabbits

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          Abstract

          Rabbit haemorrhagic disease virus 2 (RHDV2 or GI.2, referring to any virus with lagovirus GI.2 structural genes) is a recently emerged calicivirus that causes generalised hepatic necrosis and disseminated intravascular coagulation leading to death in susceptible lagomorphs (rabbits and hares). Previous studies investigating the virulence of RHDV2 have reported conflicting results, with case fatality rates ranging from 0% to 100% even within a single study. Lagoviruses are of particular importance in Australia and New Zealand where they are used as biocontrol agents to manage wild rabbit populations, which threaten over 300 native species and result in economic impacts in excess of $200 million AUD annually to Australian agricultural industries. It is critically important that any pest control method is both highly effective (i.e., virulent, in the context of viral biocontrols) and has minimal animal welfare impacts. To determine whether RHDV2 might be a suitable candidate biocontrol agent, we investigated the virulence and disease progression of a naturally occurring Australian recombinant RHDV2 in both 5-week-old and 11-week-old New Zealand White laboratory rabbits after either high or low dose oral infection. Objective measures of disease progression were recorded through continuous body temperature monitoring collars, continuous activity monitors, and twice daily observations. We observed a 100% case fatality rate in both infected kittens and adult rabbits after either high dose or low dose infection. Clinical signs of disease, such as pyrexia, weight loss, and reduced activity, were evident in the late stages of infection. Clinical disease, i.e., welfare impacts, were limited to the period after the onset of pyrexia, lasting on average 12 h and increasing in severity as disease progressed. These findings confirm the high virulence of this RHDV2 variant in naïve rabbits. While age and infectious dose significantly affected disease progression, the case fatality rate was consistently 100% under all conditions tested.

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            The Split-Apply-Combine Strategy for Data Analysis

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              Norovirus recombination.

              RNA recombination is a significant driving force in viral evolution. Increased awareness of recombination within the genus Norovirus of the family Calicivirus has led to a rise in the identification of norovirus (NoV) recombinants and they are now reported at high frequency. Currently, there is no classification system for recombinant NoVs and a widely accepted recombinant genotyping system is still needed. Consequently, there is duplication in reporting of novel recombinants. This has led to difficulties in defining the number and types of recombinants in circulation. In this study, 120 NoV nucleotide sequences were compiled from the current GenBank database and published literature. NoV recombinants and their recombination breakpoints were identified using three methods: phylogenetic analysis, SimPlot analysis and the maximum chi2 method. A total of 20 NoV recombinant types were identified in circulation worldwide. The recombination point is the ORF1/2 overlap in all isolates except one, which demonstrated a double recombination event within the polymerase region.
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                Author and article information

                Contributors
                Role: Academic Editor
                Journal
                Viruses
                Viruses
                viruses
                Viruses
                MDPI
                1999-4915
                21 June 2021
                June 2021
                : 13
                : 6
                : 1184
                Affiliations
                [1 ]Health & Biosecurity, Commonwealth Scientific and Industrial Research Organisation, Acton, ACT 2601, Australia; tegan.king4891@ 123456gmail.com (T.K.); Tanja.Strive@ 123456csiro.au (T.S.)
                [2 ]Centre for Invasive Species Solutions, Bruce, ACT 2617, Australia
                [3 ]NSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Menangle, NSW 2568, Australia; tiffany.o'connor@ 123456dpi.nsw.gov.au (T.O.); andrew.j.read@ 123456dpi.nsw.gov.au (A.J.R.)
                [4 ]Wildlife Ecology and Management, Manaaki Whenua-Landcare Research, Lincoln 7608, New Zealand; ArrowJ@ 123456landcareresearch.co.nz (J.A.); TroughtK@ 123456landcareresearch.co.nz (K.T.); DuckworthJ@ 123456landcareresearch.co.nz (J.D.)
                [5 ]Agriculture & Food, Commonwealth Scientific and Industrial Research Organisation, Acton, ACT 2601, Australia; Melissa.Piper@ 123456csiro.au
                Author notes
                [* ]Correspondence: Robyn.Hall@ 123456csiro.au
                Author information
                https://orcid.org/0000-0002-5836-2990
                https://orcid.org/0000-0002-2421-4287
                https://orcid.org/0000-0003-0881-7747
                Article
                viruses-13-01184
                10.3390/v13061184
                8234499
                ce464adb-bc30-4cdc-8731-3ca3c4baeca1
                © 2021 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( https://creativecommons.org/licenses/by/4.0/).

                History
                : 17 May 2021
                : 19 June 2021
                Categories
                Article

                Microbiology & Virology
                rabbit haemorrhagic disease virus,lagovirus,virulence,calicivirus,rhdv2,animal welfare,rabbit

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