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      Human organoid biofilm model for assessing antibiofilm activity of novel agents

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          Abstract

          Bacterial biofilms cause 65% of all human infections and are highly resistant to antibiotic therapy but lack specific treatments. To provide a human organoid model for studying host-microbe interplay and enabling screening for novel antibiofilm agents, a human epidermis organoid model with robust methicillin-resistant Staphylococcus aureus (MRSA) USA300 and Pseudomonas aeruginosa PAO1 biofilm was developed. Treatment of 1-day and 3-day MRSA and PAO1 biofilms with antibiofilm peptide DJK-5 significantly and substantially reduced the bacterial burden. This model enabled the screening of synthetic host defense peptides, revealing their superior antibiofilm activity against MRSA compared to the antibiotic mupirocin. The model was extended to evaluate thermally wounded skin infected with MRSA biofilms resulting in increased bacterial load, cytotoxicity, and pro-inflammatory cytokine levels that were all reduced upon treatment with DJK-5. Combination treatment of DJK-5 with an anti-inflammatory peptide, 1002, further reduced cytotoxicity and skin inflammation.

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          Most cited references61

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          Fiji: an open-source platform for biological-image analysis.

          Fiji is a distribution of the popular open-source software ImageJ focused on biological-image analysis. Fiji uses modern software engineering practices to combine powerful software libraries with a broad range of scripting languages to enable rapid prototyping of image-processing algorithms. Fiji facilitates the transformation of new algorithms into ImageJ plugins that can be shared with end users through an integrated update system. We propose Fiji as a platform for productive collaboration between computer science and biology research communities.
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            Antibiotic resistance: a rundown of a global crisis

            The advent of multidrug resistance among pathogenic bacteria is imperiling the worth of antibiotics, which have previously transformed medical sciences. The crisis of antimicrobial resistance has been ascribed to the misuse of these agents and due to unavailability of newer drugs attributable to exigent regulatory requirements and reduced financial inducements. Comprehensive efforts are needed to minimize the pace of resistance by studying emergent microorganisms, resistance mechanisms, and antimicrobial agents. Multidisciplinary approaches are required across health care settings as well as environment and agriculture sectors. Progressive alternate approaches including probiotics, antibodies, and vaccines have shown promising results in trials that suggest the role of these alternatives as preventive or adjunct therapies in future.
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              Bacterial biofilm and associated infections.

              Microscopic entities, microorganisms that drastically affect human health need to be thoroughly investigated. A biofilm is an architectural colony of microorganisms, within a matrix of extracellular polymeric substance that they produce. Biofilm contains microbial cells adherent to one-another and to a static surface (living or non-living). Bacterial biofilms are usually pathogenic in nature and can cause nosocomial infections. The National Institutes of Health (NIH) revealed that among all microbial and chronic infections, 65% and 80%, respectively, are associated with biofilm formation. The process of biofilm formation consists of many steps, starting with attachment to a living or non-living surface that will lead to formation of micro-colony, giving rise to three-dimensional structures and ending up, after maturation, with detachment. During formation of biofilm several species of bacteria communicate with one another, employing quorum sensing. In general, bacterial biofilms show resistance against human immune system, as well as against antibiotics. Health related concerns speak loud due to the biofilm potential to cause diseases, utilizing both device-related and non-device-related infections. In summary, the understanding of bacterial biofilm is important to manage and/or to eradicate biofilm-related diseases. The current review is, therefore, an effort to encompass the current concepts in biofilm formation and its implications in human health and disease.
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                Author and article information

                Contributors
                bob@hancocklab.com
                Journal
                NPJ Biofilms Microbiomes
                NPJ Biofilms Microbiomes
                NPJ Biofilms and Microbiomes
                Nature Publishing Group UK (London )
                2055-5008
                25 January 2021
                25 January 2021
                2021
                : 7
                : 8
                Affiliations
                [1 ]GRID grid.17091.3e, ISNI 0000 0001 2288 9830, Department of Microbiology and Immunology, , University of British Columbia, ; Vancouver, BC Canada
                [2 ]GRID grid.29980.3a, ISNI 0000 0004 1936 7830, Department of Microbiology and Immunology, , University of Otago, ; Dunedin, Otago New Zealand
                [3 ]GRID grid.10419.3d, ISNI 0000000089452978, Department of Infectious Diseases, , Leiden University Medical Center, ; Leiden, The Netherlands
                Author information
                http://orcid.org/0000-0002-4623-1934
                http://orcid.org/0000-0003-3645-770X
                http://orcid.org/0000-0001-5750-7505
                http://orcid.org/0000-0002-0927-314X
                http://orcid.org/0000-0001-5989-8503
                Article
                182
                10.1038/s41522-020-00182-4
                7835231
                33495449
                d8988cee-1007-418c-bb02-623f3a08b46b
                © The Author(s) 2021

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 5 August 2020
                : 11 December 2020
                Funding
                Funded by: Canadian Institutes of Health Research (CIHR) [funding reference number FDN-154287] the Michael Smith Foundation for Health Research Innovation to Commercialization Program
                Funded by: Canadian Institutes of Health Research (CIHR) [funding reference number FDN-154287] the Michael Smith Foundation for Health Research Innovation to Commercialization Program Also supported by a Cystic Fibrosis Canada Postdoctoral fellowship and a fellowship from the Michael Smith Foundation for Health Research
                Categories
                Article
                Custom metadata
                © The Author(s) 2021

                biofilms,antimicrobials
                biofilms, antimicrobials

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