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      In and out of Madagascar: Dispersal to Peripheral Islands, Insular Speciation and Diversification of Indian Ocean Daisy Trees ( Psiadia, Asteraceae)

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          Abstract

          Madagascar is surrounded by archipelagos varying widely in origin, age and structure. Although small and geologically young, these archipelagos have accumulated disproportionate numbers of unique lineages in comparison to Madagascar, highlighting the role of waif-dispersal and rapid in situ diversification processes in generating endemic biodiversity. We reconstruct the evolutionary and biogeographical history of the genus Psiadia (Asteraceae), a plant genus with near equal numbers of species in Madagascar and surrounding islands. Analyzing patterns and processes of diversification, we explain species accumulation on peripheral islands and aim to offer new insights on the origin and potential causes for diversification in the Madagascar and Indian Ocean Islands biodiversity hotspot. Our results provide support for an African origin of the group, with strong support for non-monophyly. Colonization of the Mascarenes took place by two evolutionary distinct lineages from Madagascar, via two independent dispersal events, each unique for their spatial and temporal properties. Significant shifts in diversification rate followed regional expansion, resulting in co-occurring and phenotypically convergent species on high-elevation volcanic slopes. Like other endemic island lineages, Psiadia have been highly successful in dispersing to and radiating on isolated oceanic islands, typified by high habitat diversity and dynamic ecosystems fuelled by continued geological activity. Results stress the important biogeographical role for Rodrigues in serving as an outlying stepping stone from which regional colonization took place. We discuss how isolated volcanic islands contribute to regional diversity by generating substantial numbers of endemic species on short temporal scales. Factors pertaining to the mode and tempo of archipelago formation and its geographical isolation strongly govern evolutionary pathways available for species diversification, and the potential for successful diversification of dispersed lineages, therefore, appears highly dependent on the timing of arrival, as habitat and resource properties change dramatically over the course of oceanic island evolution.

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          MRBAYES: Bayesian inference of phylogenetic trees.

          The program MRBAYES performs Bayesian inference of phylogeny using a variant of Markov chain Monte Carlo. MRBAYES, including the source code, documentation, sample data files, and an executable, is available at http://brahms.biology.rochester.edu/software.html.
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            Chronology of fluctuating sea levels since the triassic.

            Advances in sequence stratigraphy and the development of depositional models have helped explain the origin of genetically related sedimentary packages during sea level cycles. These concepts have provided the basis for the recognition of sea level events in subsurface data and in outcrops of marine sediments around the world. Knowledge of these events has led to a new generation of Mesozoic and Cenozoic global cycle charts that chronicle the history of sea level fluctuations during the past 250 million years in greater detail than was possible from seismic-stratigraphic data alone. An effort has been made to develop a realistic and accurate time scale and widely applicable chronostratigraphy and to integrate depositional sequences documented in public domain outcrop sections from various basins with this chronostratigraphic framework. A description of this approach and an account of the results, illustrated by sea level cycle charts of the Cenozoic, Cretaceous, Jurassic, and Triassic intervals, are presented.
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              Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae).

              The coding region of the mat K gene and two intergenic spacers, psb A-trn H and trn L(UAA)-trn F(GAA), of cpDNA were sequenced to study phylogenetic relationships of 32 Paeonia species. In the psb A-trn H intergenic spacer, short sequences bordered by long inverted repeats have undergone inversions that are often homoplasious mutations. Insertions/deletions found in the two intergenic spacers, mostly resulting from slipped-strand mispairing, provided relatively reliable phylogenetic information. The mat K coding region, evolving more rapidly than the trnL-trn F spacer and more slowly than the psb A-trn H spacer, produced the best resolved phylogenetic tree. The mat K phylogeny was compared with the phylogeny obtained from sequences of internal transcribed spacers (ITS) of nuclear ribosomal DNA. A refined hypothesis of species phylogeny of section Paeonia was proposed by considering the discordance between the nuclear and cpDNA phylogenies to be results of hybrid speciation followed by inheritance of cpDNA of one parent and fixation of ITS sequences of another parent. The Eurasian and western North American disjunct distribution of the genus may have resulted from interrruption of the continuous distribution of ancestral populations of extant peony species across the Bering land bridge during the Miocene. Pleistocene glaciation may have played an important role in triggering extensive reticulate evolution within section Paeonia and shifting distributional ranges of both parental and hybrid species.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, USA )
                1932-6203
                2012
                10 August 2012
                : 7
                : 8
                : e42932
                Affiliations
                [1 ]Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, People's Republic of China
                [2 ]Laboratoire Evolution et Diversité Biologique, UMR CNRS 5174 – Université Paul Sabatier – ENFA, Toulouse, France
                [3 ]Department of Biology, University of Central Arkansas, Conway, Arkansas, United States of America
                [4 ]Université de la Réunion, UMR PVBMT, Faculté des Sciences et Technologies, Saint-Denis, La Réunion, France
                [5 ]CEA, Institut de Génomique, Genoscope, Centre National de Séquençage, Evry, France
                [6 ]Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey, United Kingdom
                [7 ]Mitchell Building, School of Biology, University of St. Andrews, St. Andrews, Fife, United Kingdom
                University of California, Berkeley, United States of America
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                Conceived and designed the experiments: JSS RJA CT. Performed the experiments: JSS RDN CC FG CT. Analyzed the data: JSS CT. Contributed reagents/materials/analysis tools: JSS MWC RJA CT. Wrote the paper: JSS RDN DS MWC RJA CT.

                Article
                PONE-D-12-14691
                10.1371/journal.pone.0042932
                3416790
                22900068
                df7caaf0-c898-48ee-a8b9-114e5104e579
                Copyright @ 2012

                This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 20 May 2012
                : 16 July 2012
                Page count
                Pages: 17
                Funding
                This study was supported by the European Union's HOTSPOTS Training Network (MEST-2005-020561), the French National Research Agency's Biodiversity program (ANR-06-BDIV-002) and the “Laboratoire d'Excellence” TULIP (ANR-10-LABX-41). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Biology
                Biochemistry
                Nucleic Acids
                DNA
                DNA amplification
                Ecology
                Biodiversity
                Biogeography
                Terrestrial Ecology
                Evolutionary Biology
                Evolutionary Processes
                Speciation
                Evolutionary Systematics
                Taxonomy
                Plant Taxonomy
                Molecular Systematics
                Phylogenetics
                Forms of Evolution
                Paleontology
                Biogeography
                Plant Science
                Plants
                Angiosperms
                Botany
                Plant Evolution
                Plant Phylogenetics
                Earth Sciences
                Geography
                Biogeography
                Geology
                Geologic Time

                Uncategorized
                Uncategorized

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