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      A critical analysis of plant science literature reveals ongoing inequities

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          Significance

          We analyzed ~300,000 papers published over the past two decades to quantify global, gender, and taxonomic disparities in plant science. Our analyses reveal striking geographical biases that are correlated with national affluence. Gender imbalances were also evident, with far more papers led by authors with masculine names than those by authors with feminine names. Last, we identified substantial taxonomic sampling gaps. The vast majority of surveyed studies focused on major crop and model species, and the remaining biodiversity accounted for only a fraction of publications. Taken together, our analyses represent an important addition to the growing conversation about diversifying and decolonizing science.

          Abstract

          The field of plant science has grown dramatically in the past two decades, but global disparities and systemic inequalities persist. Here, we analyzed ~300,000 papers published over the past two decades to quantify disparities across nations, genders, and taxonomy in the plant science literature. Our analyses reveal striking geographical biases—affluent nations dominate the publishing landscape and vast areas of the globe have virtually no footprint in the literature. Authors in Northern America are cited nearly twice as many times as authors based in Sub-Saharan Africa and Latin America, despite publishing in journals with similar impact factors. Gender imbalances are similarly stark and show remarkably little improvement over time. Some of the most affluent nations have extremely male biased publication records, despite supposed improvements in gender equality. In addition, we find that most studies focus on economically important crop and model species, and a wealth of biodiversity is underrepresented in the literature. Taken together, our analyses reveal a problematic system of publication, with persistent imbalances that poorly capture the global wealth of scientific knowledge and biological diversity. We conclude by highlighting disparities that can be addressed immediately and offer suggestions for long-term solutions to improve equity in the plant sciences.

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          Most cited references54

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          ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data

          The Environment for Tree Exploration (ETE) is a computational framework that simplifies the reconstruction, analysis, and visualization of phylogenetic trees and multiple sequence alignments. Here, we present ETE v3, featuring numerous improvements in the underlying library of methods, and providing a novel set of standalone tools to perform common tasks in comparative genomics and phylogenetics. The new features include (i) building gene-based and supermatrix-based phylogenies using a single command, (ii) testing and visualizing evolutionary models, (iii) calculating distances between trees of different size or including duplications, and (iv) providing seamless integration with the NCBI taxonomy database. ETE is freely available at http://etetoolkit.org
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            Growth, innovation, scaling, and the pace of life in cities.

            Humanity has just crossed a major landmark in its history with the majority of people now living in cities. Cities have long been known to be society's predominant engine of innovation and wealth creation, yet they are also its main source of crime, pollution, and disease. The inexorable trend toward urbanization worldwide presents an urgent challenge for developing a predictive, quantitative theory of urban organization and sustainable development. Here we present empirical evidence indicating that the processes relating urbanization to economic development and knowledge creation are very general, being shared by all cities belonging to the same urban system and sustained across different nations and times. Many diverse properties of cities from patent production and personal income to electrical cable length are shown to be power law functions of population size with scaling exponents, beta, that fall into distinct universality classes. Quantities reflecting wealth creation and innovation have beta approximately 1.2 >1 (increasing returns), whereas those accounting for infrastructure display beta approximately 0.8 <1 (economies of scale). We predict that the pace of social life in the city increases with population size, in quantitative agreement with data, and we discuss how cities are similar to, and differ from, biological organisms, for which beta<1. Finally, we explore possible consequences of these scaling relations by deriving growth equations, which quantify the dramatic difference between growth fueled by innovation versus that driven by economies of scale. This difference suggests that, as population grows, major innovation cycles must be generated at a continually accelerating rate to sustain growth and avoid stagnation or collapse.
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              The gender gap in science: How long until women are equally represented?

              Women comprise a minority of the Science, Technology, Engineering, Mathematics, and Medicine (STEMM) workforce. Quantifying the gender gap may identify fields that will not reach parity without intervention, reveal underappreciated biases, and inform benchmarks for gender balance among conference speakers, editors, and hiring committees. Using the PubMed and arXiv databases, we estimated the gender of 36 million authors from >100 countries publishing in >6000 journals, covering most STEMM disciplines over the last 15 years, and made a web app allowing easy access to the data (https://lukeholman.github.io/genderGap/). Despite recent progress, the gender gap appears likely to persist for generations, particularly in surgery, computer science, physics, and maths. The gap is especially large in authorship positions associated with seniority, and prestigious journals have fewer women authors. Additionally, we estimate that men are invited by journals to submit papers at approximately double the rate of women. Wealthy countries, notably Japan, Germany, and Switzerland, had fewer women authors than poorer ones. We conclude that the STEMM gender gap will not close without further reforms in education, mentoring, and academic publishing.
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                Author and article information

                Contributors
                Journal
                Proc Natl Acad Sci U S A
                Proc Natl Acad Sci U S A
                PNAS
                Proceedings of the National Academy of Sciences of the United States of America
                National Academy of Sciences
                0027-8424
                1091-6490
                28 February 2023
                7 March 2023
                28 August 2023
                : 120
                : 10
                : e2217564120
                Affiliations
                [1] aDepartment of Horticulture, Michigan State University , East Lansing, MI 48824
                [2] bPlant Resilience Institute, Michigan State University , East Lansing, MI 48824
                [3] cDepartment of Molecular and Cell Biology, University of Cape Town , Rondebosch 7701, South Africa
                [4] dDepartment of Computational Mathematics, Science, and Engineering, Michigan State University , East Lansing, MI 48824
                [5] eDepartment of Biochemistry and Molecular Biology, Michigan State University , East Lansing, MI 48824
                [6] fLaboratory of Agrigenomic Sciences, Universidad Nacional Autónoma de México, La Escuela Nacional de Estudios Superiores Unidad León , León 37689, México
                [7] gPlantec National Laboratory, ENES-León , León 37689, México
                [8] hIntercultural Development and Management, Universidad Nacional Autónoma de México, ENES-León , León 37689, México
                Author notes
                2To whom correspondence may be addressed. Email: marksr49@ 123456gmail.com .

                Edited by Douglas Soltis, University of Florida, Gainesville, FL; received October 15, 2022; accepted January 18, 2023

                1R.A.M., E.J.A., and S.P. contributed equally to this work.

                Author information
                https://orcid.org/0000-0001-7102-5959
                https://orcid.org/0000-0002-1450-7967
                https://orcid.org/0000-0003-2133-2760
                Article
                202217564
                10.1073/pnas.2217564120
                10013813
                36853942
                df982ffe-1ac5-4276-98a4-52f6ddaccc81
                Copyright © 2023 the Author(s). Published by PNAS.

                This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND).

                History
                : 15 October 2022
                : 18 January 2023
                Page count
                Pages: 11, Words: 6581
                Funding
                Funded by: National Science Foundation (NSF), FundRef 100000001;
                Award ID: PRFB-1906094
                Award Recipient : Rose A Marks
                Categories
                dataset, Dataset
                research-article, Research Article
                plant-bio, Plant Biology
                428
                Biological Sciences
                Plant Biology

                diversity,inclusion,gender equality,eurocentrism,taxonomic gaps

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