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      Multicanonical jump walk annealing: An efficient method for geometric optimization

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      The Journal of Chemical Physics
      AIP Publishing

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          Global Optimization by Basin-Hopping and the Lowest Energy Structures of Lennard-Jones Clusters Containing up to 110 Atoms

          We describe a global optimization technique using `basin-hopping' in which the potential energy surface is transformed into a collection of interpenetrating staircases. This method has been designed to exploit the features which recent work suggests must be present in an energy landscape for efficient relaxation to the global minimum. The transformation associates any point in configuration space with the local minimum obtained by a geometry optimization started from that point, effectively removing transition state regions from the problem. However, unlike other methods based upon hypersurface deformation, this transformation does not change the global minimum. The lowest known structures are located for all Lennard-Jones clusters up to 110 atoms, including a number that have never been found before in unbiased searches.
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            Monte Carlo-minimization approach to the multiple-minima problem in protein folding.

            A Monte Carlo-minimization method has been developed to overcome the multiple-minima problem. The Metropolis Monte Carlo sampling, assisted by energy minimization, surmounts intervening barriers in moving through successive discrete local minima in the multidimensional energy surface. The method has located the lowest-energy minimum thus far reported for the brain pentapeptide [Met5]enkephalin in the absence of water. Presumably it is the global minimum-energy structure. This supports the concept that protein folding may be a Markov process. In the presence of water, the molecules appear to exist as an ensemble of different conformations.
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              Multicanonical Ensemble: A New Approach to Simulate First-order Phase Transitions

              Relying on the recently proposed multicanonical algorithm, we present a numerical simulation of the first order phase transition in the 2d 10-state Potts model on lattices up to sizes \(100\times100\). It is demonstrated that the new algorithm \(lacks\) an exponentially fast increase of the tunneling time between metastable states as a function of the linear size \(L\) of the system. Instead, the tunneling time diverges approximately proportional to \(L^{2.65}\). Thus the computational effort as counted per degree of freedom for generating an independent configuration in the unstable region of the model rises proportional to \(V^{2.3}\), where \(V\) is the volume of the system. On our largest lattice we gain more than two orders of magnitude as compared to a standard heat bath algorithm. As a first physical application we report a high precision computation of the interfacial tension.
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                Author and article information

                Journal
                The Journal of Chemical Physics
                The Journal of Chemical Physics
                AIP Publishing
                0021-9606
                1089-7690
                February 08 2000
                February 08 2000
                : 112
                : 6
                : 2701-2708
                Article
                10.1063/1.480844
                ec9a2991-b452-40a7-9ce4-c188251290b7
                © 2000
                History

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