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      High-Performance Deep Neural Network-Based Tomato Plant Diseases and Pests Diagnosis System With Refinement Filter Bank

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          Abstract

          A fundamental problem that confronts deep neural networks is the requirement of a large amount of data for a system to be efficient in complex applications. Promising results of this problem are made possible through the use of techniques such as data augmentation or transfer learning of pre-trained models in large datasets. But the problem still persists when the application provides limited or unbalanced data. In addition, the number of false positives resulting from training a deep model significantly cause a negative impact on the performance of the system. This study aims to address the problem of false positives and class unbalance by implementing a Refinement Filter Bank framework for Tomato Plant Diseases and Pests Recognition. The system consists of three main units: First, a Primary Diagnosis Unit (Bounding Box Generator) generates the bounding boxes that contain the location of the infected area and class. The promising boxes belonging to each class are then used as input to a Secondary Diagnosis Unit (CNN Filter Bank) for verification. In this second unit, misclassified samples are filtered through the training of independent CNN classifiers for each class. The result of the CNN Filter Bank is a decision of whether a target belongs to the category as it was detected (True) or not (False) otherwise. Finally, an integration unit combines the information from the primary and secondary units while keeping the True Positive samples and eliminating the False Positives that were misclassified in the first unit. By this implementation, the proposed approach is able to obtain a recognition rate of approximately 96%, which represents an improvement of 13% compared to our previous work in the complex task of tomato diseases and pest recognition. Furthermore, our system is able to deal with the false positives generated by the bounding box generator, and class unbalances that appear especially on datasets with limited data.

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          Most cited references33

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          Aggregated Residual Transformations for Deep Neural Networks

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            Using Deep Learning for Image-Based Plant Disease Detection

            Crop diseases are a major threat to food security, but their rapid identification remains difficult in many parts of the world due to the lack of the necessary infrastructure. The combination of increasing global smartphone penetration and recent advances in computer vision made possible by deep learning has paved the way for smartphone-assisted disease diagnosis. Using a public dataset of 54,306 images of diseased and healthy plant leaves collected under controlled conditions, we train a deep convolutional neural network to identify 14 crop species and 26 diseases (or absence thereof). The trained model achieves an accuracy of 99.35% on a held-out test set, demonstrating the feasibility of this approach. Overall, the approach of training deep learning models on increasingly large and publicly available image datasets presents a clear path toward smartphone-assisted crop disease diagnosis on a massive global scale.
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              Deep learning models for plant disease detection and diagnosis

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                Author and article information

                Contributors
                Journal
                Front Plant Sci
                Front Plant Sci
                Front. Plant Sci.
                Frontiers in Plant Science
                Frontiers Media S.A.
                1664-462X
                29 August 2018
                2018
                : 9
                : 1162
                Affiliations
                [1] 1Department of Electronics Engineering, Chonbuk National University , Jeonju, South Korea
                [2] 2Department of Computer Engineering, Mokpo National University , Muan, South Korea
                [3] 3Department of Agricultural Engineering, National Institute of Agricultural Sciences (RDA) , Jeonju, South Korea
                [4] 4College of Computer Science and Information Engineering, Tianjin University of Science and Technology , Tianjin, China
                [5] 5Division of Electronics and Information Engineering, Chonbuk National University , Jeonju, South Korea
                Author notes

                Edited by: Minjun Chen, National Center for Toxicological Research (FDA), United States

                Reviewed by: Konstantinos Ferentinos, Hellenic Agricultural Organization–ELGO, Greece; Tieliu Shi, East China Normal University, China

                *Correspondence: Dong Sun Park dspark@ 123456jbnu.ac.kr

                This article was submitted to Bioinformatics and Computational Biology, a section of the journal Frontiers in Plant Science

                Article
                10.3389/fpls.2018.01162
                6124392
                30210509
                f69ad029-cb33-4c6c-a250-cd006cf69ca3
                Copyright © 2018 Fuentes, Yoon, Lee and Park.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 16 April 2018
                : 23 July 2018
                Page count
                Figures: 15, Tables: 3, Equations: 4, References: 41, Pages: 15, Words: 9642
                Categories
                Plant Science
                Original Research

                Plant science & Botany
                plant diseases,detection,deep neural networks,filter banks,false positives
                Plant science & Botany
                plant diseases, detection, deep neural networks, filter banks, false positives

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