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      Challenges in developing methods for quantifying the effects of weather and climate on water-associated diseases: A systematic review

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          Abstract

          Infectious diseases attributable to unsafe water supply, sanitation and hygiene ( e. g. Cholera, Leptospirosis, Giardiasis) remain an important cause of morbidity and mortality, especially in low-income countries. Climate and weather factors are known to affect the transmission and distribution of infectious diseases and statistical and mathematical modelling are continuously developing to investigate the impact of weather and climate on water-associated diseases. There have been little critical analyses of the methodological approaches. Our objective is to review and summarize statistical and modelling methods used to investigate the effects of weather and climate on infectious diseases associated with water, in order to identify limitations and knowledge gaps in developing of new methods. We conducted a systematic review of English-language papers published from 2000 to 2015. Search terms included concepts related to water-associated diseases, weather and climate, statistical, epidemiological and modelling methods. We found 102 full text papers that met our criteria and were included in the analysis. The most commonly used methods were grouped in two clusters: process-based models (PBM) and time series and spatial epidemiology (TS-SE). In general, PBM methods were employed when the bio-physical mechanism of the pathogen under study was relatively well known ( e. g. Vibrio cholerae); TS-SE tended to be used when the specific environmental mechanisms were unclear ( e. g. Campylobacter). Important data and methodological challenges emerged, with implications for surveillance and control of water-associated infections. The most common limitations comprised: non-inclusion of key factors ( e. g. biological mechanism, demographic heterogeneity, human behavior), reporting bias, poor data quality, and collinearity in exposures. Furthermore, the methods often did not distinguish among the multiple sources of time-lags ( e. g. patient physiology, reporting bias, healthcare access) between environmental drivers/exposures and disease detection. Key areas of future research include: disentangling the complex effects of weather/climate on each exposure-health outcome pathway ( e. g. person-to-person vs environment-to-person), and linking weather data to individual cases longitudinally.

          Author summary

          Unsafe water supplies, limited sanitation and poor hygiene are still important causes of infectious disease ( e. g. Cholera, Leptospirosis, Giardiasis), especially in low-income countries. Climate and weather affect the transmission and distribution of infectious diseases. Therefore, scientists are continuously developing new analysis methods to investigate the impacts of weather and climate on infectious disease, and particularly, on those associated with water. As these methods are based on an imperfect representation of the real world, they are inevitably subjected to many challenges. Based on a systematic review of the literature, we identified seven important challenges for scientists who develop new analysis methods.

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          The Matthew Effect in Science: The reward and communication systems of science are considered.

          R K Merton (1968)
          This account of the Matthew effect is another small exercise in the psychosociological analysis of the workings of science as a social institution. The initial problem is transformed by a shift in theoretical perspective. As originally identified, the Matthew effect was construed in terms of enhancement of the position of already eminent scientists who are given disproportionate credit in cases of collaboration or of independent multiple discoveries. Its significance was thus confined to its implications for the reward system of science. By shifting the angle of vision, we note other possible kinds of consequences, this time for the communication system of science. The Matthew effect may serve to heighten the visibility of contributions to science by scientists of acknowledged standing and to reduce the visibility of contributions by authors who are less well known. We examine the psychosocial conditions and mechanisms underlying this effect and find a correlation between the redundancy function of multiple discoveries and the focalizing function of eminent men of science-a function which is reinforced by the great value these men place upon finding basic problems and by their self-assurance. This self-assurance, which is partly inherent, partly the result of experiences and associations in creative scientific environments, and partly a result of later social validation of their position, encourages them to search out risky but important problems and to highlight the results of their inquiry. A macrosocial version of the Matthew principle is apparently involved in those processes of social selection that currently lead to the concentration of scientific resources and talent (50).
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            A dynamic approach to predicting bacterial growth in food.

            A new member of the family of growth models described by Baranyi et al. (1993a) is introduced in which the physiological state of the cells is represented by a single variable. The duration of lag is determined by the value of that variable at inoculation and by the post-inoculation environment. When the subculturing procedure is standardized, as occurs in laboratory experiments leading to models, the physiological state of the inoculum is relatively constant and independent of subsequent growth conditions. It is shown that, with cells with the same pre-inoculation history, the product of the lag parameter and the maximum specific growth rate is a simple transformation of the initial physiological state. An important consequence is that it is sufficient to estimate this constant product and to determine how the environmental factors define the specific growth rate without modelling the environment dependence of the lag separately. Assuming that the specific growth rate follows the environmental changes instantaneously, the new model can also describe the bacterial growth in an environment where the factors, such as temperature, pH and aw, change with time.
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              Burden of disease from inadequate water, sanitation and hygiene in low- and middle-income settings: a retrospective analysis of data from 145 countries

              Objective To estimate the burden of diarrhoeal diseases from exposure to inadequate water, sanitation and hand hygiene in low- and middle-income settings and provide an overview of the impact on other diseases. Methods For estimating the impact of water, sanitation and hygiene on diarrhoea, we selected exposure levels with both sufficient global exposure data and a matching exposure-risk relationship. Global exposure data were estimated for the year 2012, and risk estimates were taken from the most recent systematic analyses. We estimated attributable deaths and disability-adjusted life years (DALYs) by country, age and sex for inadequate water, sanitation and hand hygiene separately, and as a cluster of risk factors. Uncertainty estimates were computed on the basis of uncertainty surrounding exposure estimates and relative risks. Results In 2012, 502 000 diarrhoea deaths were estimated to be caused by inadequate drinking water and 280 000 deaths by inadequate sanitation. The most likely estimate of disease burden from inadequate hand hygiene amounts to 297 000 deaths. In total, 842 000 diarrhoea deaths are estimated to be caused by this cluster of risk factors, which amounts to 1.5% of the total disease burden and 58% of diarrhoeal diseases. In children under 5 years old, 361 000 deaths could be prevented, representing 5.5% of deaths in that age group. Conclusions This estimate confirms the importance of improving water and sanitation in low- and middle-income settings for the prevention of diarrhoeal disease burden. It also underscores the need for better data on exposure and risk reductions that can be achieved with provision of reliable piped water, community sewage with treatment and hand hygiene.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS Negl Trop Dis
                PLoS Negl Trop Dis
                plos
                plosntds
                PLoS Neglected Tropical Diseases
                Public Library of Science (San Francisco, CA USA )
                1935-2727
                1935-2735
                12 June 2017
                June 2017
                : 11
                : 6
                : e0005659
                Affiliations
                [1 ]Chemical and Environmental Effects Department, Centre for Radiation, Chemical and Environmental Hazards, Public Health England, Chilton, United Kingdom
                [2 ]Department of Social and Environmental Health Research, London School of Hygiene and Tropical Medicine, London, United Kingdom
                [3 ]European Centre for Environment and Human Health, University of Exeter Medical School, Truro, Cornwall, United Kingdom
                [4 ]Gastrointestinal Infections, National Infection Service, Public Health England, London, United Kingdom
                [5 ]Institute of Occupational Medicine, Edinburgh, United Kingdom
                [6 ]University of East Anglia, Norwich, United Kingdom
                [7 ]University of Thessaly, Larissa, Thessaly, Greece
                University of California Berkeley, UNITED STATES
                Author notes

                The authors have declared that no competing interests exist.

                • Conceptualization: GLI GLN.

                • Data curation: GLI.

                • Formal analysis: GLI.

                • Funding acquisition: SV LEF SK BA GLN.

                • Investigation: GLI.

                • Methodology: GLI GLN.

                • Project administration: GLI GLN.

                • Resources: GLI GLN SV BA LEF SK RE.

                • Software: GLI.

                • Supervision: GLI GLN SV BA LEF SK RE.

                • Validation: GLI.

                • Visualization: GLI.

                • Writing – original draft: GLI.

                • Writing – review & editing: GLI GLN SV BA LEF SK RE.

                Author information
                http://orcid.org/0000-0002-6150-2843
                Article
                PNTD-D-17-00116
                10.1371/journal.pntd.0005659
                5481148
                28604791
                fd179128-a714-4921-8f6b-bbfedf0fdea9
                © 2017 Lo Iacono et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 31 January 2017
                : 23 May 2017
                Page count
                Figures: 7, Tables: 3, Pages: 35
                Funding
                Funded by: funder-id http://dx.doi.org/10.13039/501100000272, National Institute for Health Research;
                This work was supported by the National Institute for Health Research Health Protection Research Unit (NIHR HPRU) in Environmental Change and Health at the London School of Hygiene and Tropical Medicine in partnership with Public Health England (PHE), and in collaboration with the University of Exeter, University College London, and the Met Office; and the UK Medical Research Council (MRC) and UK Natural Environment Research Council (NERC) for the MEDMI Project. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR, the Department of Health or Public Health England. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Ecology and Environmental Sciences
                Natural Resources
                Water Resources
                Earth Sciences
                Atmospheric Science
                Climatology
                Climate Change
                Engineering and Technology
                Environmental Engineering
                Pollution
                Water Pollution
                Medicine and Health Sciences
                Pathology and Laboratory Medicine
                Pathogens
                Medicine and Health Sciences
                Infectious Diseases
                Medicine and Health Sciences
                Pulmonology
                Respiratory Infections
                Biology and Life Sciences
                Organisms
                Animals
                Invertebrates
                Flatworms
                Earth Sciences
                Atmospheric Science
                Meteorology
                Weather
                Custom metadata
                vor-update-to-uncorrected-proof
                2017-06-22
                Search terms and list of reviewed papers are available in the supporting information.

                Infectious disease & Microbiology
                Infectious disease & Microbiology

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