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      Raincloud plots: a multi-platform tool for robust data visualization

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          Abstract

          Across scientific disciplines, there is a rapidly growing recognition of the need for more statistically robust, transparent approaches to data visualization. Complementary to this, many scientists have called for plotting tools that accurately and transparently convey key aspects of statistical effects and raw data with minimal distortion. Previously common approaches, such as plotting conditional mean or median barplots together with error-bars have been criticized for distorting effect size, hiding underlying patterns in the raw data, and obscuring the assumptions upon which the most commonly used statistical tests are based. Here we describe a data visualization approach which overcomes these issues, providing maximal statistical information while preserving the desired ‘inference at a glance’ nature of barplots and other similar visualization devices. These “raincloud plots” can visualize raw data, probability density, and key summary statistics such as median, mean, and relevant confidence intervals in an appealing and flexible format with minimal redundancy. In this tutorial paper, we provide basic demonstrations of the strength of raincloud plots and similar approaches, outline potential modifications for their optimal use, and provide open-source code for their streamlined implementation in R, Python and Matlab ( https://github.com/RainCloudPlots/RainCloudPlots). Readers can investigate the R and Python tutorials interactively in the browser using Binder by Project Jupyter.

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          Most cited references15

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          Beyond Bar and Line Graphs: Time for a New Data Presentation Paradigm

          Figures in scientific publications are critically important because they often show the data supporting key findings. Our systematic review of research articles published in top physiology journals (n = 703) suggests that, as scientists, we urgently need to change our practices for presenting continuous data in small sample size studies. Papers rarely included scatterplots, box plots, and histograms that allow readers to critically evaluate continuous data. Most papers presented continuous data in bar and line graphs. This is problematic, as many different data distributions can lead to the same bar or line graph. The full data may suggest different conclusions from the summary statistics. We recommend training investigators in data presentation, encouraging a more complete presentation of data, and changing journal editorial policies. Investigators can quickly make univariate scatterplots for small sample size studies using our Excel templates.
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            Violin Plots: A Box Plot-Density Trace Synergism

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              A Layered Grammar of Graphics

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                Author and article information

                Contributors
                Role: ConceptualizationRole: MethodologyRole: Project AdministrationRole: ResourcesRole: SoftwareRole: SupervisionRole: ValidationRole: VisualizationRole: Writing – Original Draft PreparationRole: Writing – Review & Editing
                Role: ConceptualizationRole: MethodologyRole: ResourcesRole: SoftwareRole: ValidationRole: VisualizationRole: Writing – Review & Editing
                Role: ConceptualizationRole: MethodologyRole: ResourcesRole: SoftwareRole: ValidationRole: Writing – Review & Editing
                Role: ConceptualizationRole: MethodologyRole: ResourcesRole: SoftwareRole: ValidationRole: VisualizationRole: Writing – Review & Editing
                Role: ConceptualizationRole: Funding AcquisitionRole: Project AdministrationRole: SoftwareRole: SupervisionRole: VisualizationRole: Writing – Original Draft PreparationRole: Writing – Review & Editing
                Journal
                Wellcome Open Res
                Wellcome Open Res
                Wellcome Open Res
                Wellcome Open Research
                F1000 Research Limited (London, UK )
                2398-502X
                1 April 2019
                2019
                : 4
                : 63
                Affiliations
                [1 ]Aarhus Institute of Advanced Studies, Aarhus University, Aarhus, Denmark
                [2 ]Department of Psychiatry, University of Cambridge, Cambridge, UK
                [3 ]Centre of Functionally Integrative Neuroscience, Aarhus University Hospital, Aarhus, Denmark
                [4 ]Department of Mathematics, University of Padova, Padova, Italy
                [5 ]Padova Neuroscience Center, University of Padova, Padova, Italy
                [6 ]Alan Turing Institute, London, UK
                [7 ]Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, UK
                [8 ]Department of Experimental Psychology, University of Oxford, Oxford, UK
                [9 ]MRC Cognition and Brain Sciences Unit, University of Cambridge, Cambridge, UK
                [10 ]Max-Planck Centre for Computational Psychiatry and Aging, UCL/MPI Berlin, London, UK
                [1 ]Rodin Scientific, LLC, Albuquerque, MN, USA
                [1 ]Institute of Neuroscience and Psychology, University of Glasgow, Glasgow, UK
                Author notes

                No competing interests were disclosed.

                Competing interests: No competing interests were disclosed.

                Competing interests: No competing interests were disclosed.

                Author information
                https://orcid.org/0000-0001-9399-4179
                https://orcid.org/0000-0002-2894-0825
                https://orcid.org/0000-0001-8498-4059
                https://orcid.org/0000-0003-0700-4568
                Article
                10.12688/wellcomeopenres.15191.1
                6480976
                31069261
                0a872b72-08f8-4abe-8911-a9fd043242a7
                Copyright: © 2019 Allen M et al.

                This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 25 March 2019
                Funding
                Funded by: Engineering and Physical Sciences Research Council
                Award ID: EP/N510129/1
                Funded by: Horizon 2020
                Award ID: Grantagreementno754513
                Funded by: Wellcome Trust
                Award ID: 107392
                Funded by: Lundbeckfonden Fellowship
                Award ID: R272-2017-4345
                Funded by: Aarhus Universitets Forskningsfond
                MA is supported by a Lundbeckfonden Fellowship (R272-2017-4345), the AIAS-COFUND II fellowship programme that is supported by the Marie Skłodowska-Curie actions under the European Union’s Horizon 2020 (Grant agreement no 754513), and the Aarhus University Research Foundation, and thanks Lincoln Colling for insightful statistical discussions. KW is funded by the Alan Turing Institute under the EPSRC grant EP/N510129/1. RAK is supported by the Wellcome Trust (grant number 107392/Z/15/Z).
                The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Software Tool Article
                Articles

                data visualization,raincloud plots,r,python,matlab,barplots
                data visualization, raincloud plots, r, python, matlab, barplots

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