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      From exhaustive simulations to key principles in DNA nanoelectronics

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          Abstract

          Charge transfer can take place along double helical DNA over distances as long as 30 nanometers. However, given the active role of the thermal environment surrounding charge carriers in DNA, physical mechanisms driving the transfer process are highly debated. Moreover, the overall potential of DNA to act as a conducting material in nanoelectronic circuits is questionable. Here, we identify key principles in DNA nanoelectronics by performing an exhaustive computational study. The electronic structure of double-stranded DNA is described with a coarse-grained model. The dynamics of the molecular system and its environment is taken into account using a quantum scattering method, mimicking incoherent, elastic and inelastic effects. By analyzing all possible sequences with 3 to 7 base pairs, we identify fundamental principles in DNA nanoelectronics: The environment crucially influences the electrical conductance of DNA, and the majority of sequences conduct via a mixed, coherent-incoherent mechanism. Likewise, the metal-molecule coupling and the gateway states play significant roles in the transport behavior. While most sequences analyzed here are exposed to be rather poor electrical conductors, we identify exceptional DNA molecules, which we predict to be excellent and robust conductors of electric current over a wide range of physical conditions.

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          Most cited references34

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          Spin selectivity in electron transmission through self-assembled monolayers of double-stranded DNA.

          In electron-transfer processes, spin effects normally are seen either in magnetic materials or in systems containing heavy atoms that facilitate spin-orbit coupling. We report spin-selective transmission of electrons through self-assembled monolayers of double-stranded DNA on gold. By directly measuring the spin of the transmitted electrons with a Mott polarimeter, we found spin polarizations exceeding 60% at room temperature. The spin-polarized photoelectrons were observed even when the photoelectrons were generated with unpolarized light. The observed spin selectivity at room temperature was extremely high as compared with other known spin filters. The spin filtration efficiency depended on the length of the DNA in the monolayer and its organization.
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            Mechanisms for DNA charge transport.

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              Electron transfer between bases in double helical DNA.

              Fluorescent analogs of adenine that selectively oxidize guanine were used to investigate photoinduced electron transfer through the DNA pi-stack as a function of reactant stacking and energetics. Small variations in these factors led to profound changes in the kinetics and distance dependences of DNA-mediated electron-transfer reactions. Values of beta, a parameter reflecting the dependence of electron transfer on distance, ranged from 0.1 to 1.0 per angstrom. Strong stacking interactions result in the fastest electron-transfer kinetics. Electrons are thus transported preferentially through an intrastrand rather than interstrand pathway. Reactant energetics also modulate the distance dependence of DNA-mediated charge transport. These studies may resolve the range of disparate results previously reported, and paradigms must now be developed to describe these properties of the DNA pi-stack, which can range from insulator- to "wire"-like.
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                Author and article information

                Journal
                22 December 2017
                Article
                1712.08515
                0efa6148-7cab-4949-871c-abab736c5b49

                http://arxiv.org/licenses/nonexclusive-distrib/1.0/

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                Custom metadata
                cond-mat.mes-hall physics.chem-ph

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