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      Reproductive outcomes predicted by phase imaging with computational specificity of spermatozoon ultrastructure

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          Significance

          The high incidence of human male factor infertility suggests a need for examining new ways of evaluating sperm cells. We present an approach that combines label-free imaging and artificial intelligence to obtain nondestructive markers for reproductive outcomes. Our phase-imaging system reveals nanoscale morphological details from unlabeled cells. Deep learning, on the other hand, provides a structural specificity map segmenting with high accuracy the head, midpiece, and tail. Using these binary masks applied to the quantitative phase images, we measure precisely the dry-mass content of each component. Remarkably, we found that the dry-mass ratios represent intrinsic markers with predictive power for zygote cleavage and blastocyst development.

          Abstract

          The ability to evaluate sperm at the microscopic level, at high-throughput, would be useful for assisted reproductive technologies (ARTs), as it can allow specific selection of sperm cells for in vitro fertilization (IVF). The tradeoff between intrinsic imaging and external contrast agents is particularly acute in reproductive medicine. The use of fluorescence labels has enabled new cell-sorting strategies and given new insights into developmental biology. Nevertheless, using extrinsic contrast agents is often too invasive for routine clinical operation. Raising questions about cell viability, especially for single-cell selection, clinicians prefer intrinsic contrast in the form of phase-contrast, differential-interference contrast, or Hoffman modulation contrast. While such instruments are nondestructive, the resulting image suffers from a lack of specificity. In this work, we provide a template to circumvent the tradeoff between cell viability and specificity by combining high-sensitivity phase imaging with deep learning. In order to introduce specificity to label-free images, we trained a deep-convolutional neural network to perform semantic segmentation on quantitative phase maps. This approach, a form of phase imaging with computational specificity (PICS), allowed us to efficiently analyze thousands of sperm cells and identify correlations between dry-mass content and artificial-reproduction outcomes. Specifically, we found that the dry-mass content ratios between the head, midpiece, and tail of the cells can predict the percentages of success for zygote cleavage and embryo blastocyst formation.

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          Most cited references65

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          Image-to-Image Translation with Conditional Adversarial Networks

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            Partitioning of lipid-modified monomeric GFPs into membrane microdomains of live cells.

            Many proteins associated with the plasma membrane are known to partition into submicroscopic sphingolipid- and cholesterol-rich domains called lipid rafts, but the determinants dictating this segregation of proteins in the membrane are poorly understood. We suppressed the tendency of Aequorea fluorescent proteins to dimerize and targeted these variants to the plasma membrane using several different types of lipid anchors. Fluorescence resonance energy transfer measurements in living cells revealed that acyl but not prenyl modifications promote clustering in lipid rafts. Thus the nature of the lipid anchor on a protein is sufficient to determine submicroscopic localization within the plasma membrane.
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              Quantitative phase imaging in biomedicine

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                Author and article information

                Journal
                Proc Natl Acad Sci U S A
                Proc. Natl. Acad. Sci. U.S.A
                pnas
                pnas
                PNAS
                Proceedings of the National Academy of Sciences of the United States of America
                National Academy of Sciences
                0027-8424
                1091-6490
                4 August 2020
                20 July 2020
                20 July 2020
                : 117
                : 31
                : 18302-18309
                Affiliations
                [1] aBeckman Institute for Advanced Science and Technology, The University of Illinois at Urbana–Champaign , Urbana, IL 61801;
                [2] bDepartment of Electrical and Computer Engineering, The University of Illinois at Urbana–Champaign , Urbana, IL 61801;
                [3] cDepartment of Animal Sciences, The University of Illinois at Urbana–Champaign , Urbana, IL 61801;
                [4] dEdisto Research and Education Center, Clemson University , Blackville, SC 29817;
                [5] eDepartment of Bioengineering, The University of Illinois at Urbana–Champaign , Urbana, IL 61801
                Author notes
                2To whom correspondence may be addressed. Email: gpopescu@ 123456illinois.edu .

                Edited by John A. Rogers, Northwestern University, Evanston, IL, and approved June 12, 2020 (received for review January 29, 2020)

                Author contributions: M.E.K., M.R., M.B.W., and G.P. designed research; M.E.K., M.R., Y.R.H., S.S., S.M., L.M.N., M.K.S., G.S.S., M.J.S., and N.S. performed research; M.R. and M.B.W. contributed new reagents/analytic tools; M.E.K., Y.R.H., and N.S. analyzed data; M.E.K., M.R., Y.R.H., M.B.W., and G.P. wrote the paper; and M.B.W. and G.P. managed the project.

                1M.E.K., M.R., M.B.W., and G.P. contributed equally to this work.

                Author information
                https://orcid.org/0000-0003-2124-7750
                https://orcid.org/0000-0002-6430-1473
                https://orcid.org/0000-0002-2644-2558
                https://orcid.org/0000-0001-5589-357X
                https://orcid.org/0000-0002-8296-8095
                Article
                202001754
                10.1073/pnas.2001754117
                7414137
                32690677
                16044e78-6bac-4454-847e-be4692a79888
                Copyright © 2020 the Author(s). Published by PNAS.

                This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND).

                History
                Page count
                Pages: 8
                Funding
                Funded by: National Science Foundation (NSF) 100000001
                Award ID: CBET-0939511
                Award Recipient : Mikhail E. Kandel Award Recipient : Gabriel Popescu
                Funded by: National Science Foundation (NSF) 100000001
                Award ID: 1735252
                Award Recipient : Mikhail E. Kandel Award Recipient : Gabriel Popescu
                Funded by: HHS | NIH | National Institute of General Medical Sciences (NIGMS) 100000057
                Award ID: R01GM129709
                Award Recipient : Gabriel Popescu
                Funded by: HHS | NIH | National Cancer Institute (NCI) 100000054
                Award ID: R01CA238191
                Award Recipient : Gabriel Popescu
                Funded by: HHS | NIH | National Institute of General Medical Sciences (NIGMS) 100000057
                Award ID: 1R43GM133280-01
                Award Recipient : Gabriel Popescu
                Funded by: U.S. Department of Agriculture (USDA) 100000199
                Award ID: W-4171
                Award Recipient : Matthew B Wheeler
                Funded by: Ross Foundation 100001828
                Award ID: MBW
                Award Recipient : Matthew B Wheeler
                Categories
                Physical Sciences
                Engineering

                assisted reproduction,quantitative phase imaging,phase imaging with computational specificity,machine learning,sperm

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