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      PHYTOCHROME INTERACTING FACTOR 7 is important for early responses to elevated temperature in Arabidopsis seedlings

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          Summary

          • In response to elevated ambient temperature Arabidopsis thaliana seedlings display a thermomorphogenic response that includes elongation of hypocotyls and petioles. Phytochrome B and cryptochrome 1 are two photoreceptors also playing a role in thermomorphogenesis. Downstream of both environmental sensors PHYTOCHROME INTERACTING FACTOR 4 (PIF4) is essential to trigger this response at least in part through the production of the growth promoting hormone auxin.

          • Using a genetic approach, we identified PHYTOCHROME INTERACTING FACTOR 7 (PIF7) as a novel player for thermomorphogenesis and compared the phenotypes of pif7 and pif4 mutants. We investigated the role of PIF7 during temperature‐regulated gene expression and the regulation of PIF7 transcript and protein by temperature.

          • Furthermore, pif7 and pif4 loss‐of‐function mutants were similarly unresponsive to increased temperature. This included hypocotyl elongation and induction of genes encoding auxin biosynthetic or signalling proteins. PIF7 bound to the promoters of auxin biosynthesis and signalling genes. In response to temperature elevation PIF7 transcripts decreased while PIF7 protein levels increased rapidly.

          • Our results reveal the importance of PIF7 for thermomorphogenesis and indicate that PIF7 and PIF4 likely depend on each other possibly by forming heterodimers. Elevated temperature rapidly enhances PIF7 protein accumulation, which may contribute to the thermomorphogenic response.

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          Most cited references46

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          Phytochromes function as thermosensors in Arabidopsis.

          Plants are responsive to temperature, and some species can distinguish differences of 1°C. In Arabidopsis, warmer temperature accelerates flowering and increases elongation growth (thermomorphogenesis). However, the mechanisms of temperature perception are largely unknown. We describe a major thermosensory role for the phytochromes (red light receptors) during the night. Phytochrome null plants display a constitutive warm-temperature response, and consistent with this, we show in this background that the warm-temperature transcriptome becomes derepressed at low temperatures. We found that phytochrome B (phyB) directly associates with the promoters of key target genes in a temperature-dependent manner. The rate of phyB inactivation is proportional to temperature in the dark, enabling phytochromes to function as thermal timers that integrate temperature information over the course of the night.
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            Phytochrome B integrates light and temperature signals in Arabidopsis

            Ambient temperature regulates many aspects of plant growth and development, but its sensors are unknown. Here, we demonstrate that the phytochrome B (phyB) photoreceptor participates in temperature perception through its temperature-dependent reversion from the active Pfr state to the inactive Pr state. Increased rates of thermal reversion upon exposing Arabidopsis seedlings to warm environments reduce both the abundance of the biologically active Pfr-Pfr dimer pool of phyB and the size of the associated nuclear bodies, even in daylight. Mathematical analysis of stem growth for seedlings expressing wild-type phyB or thermally stable variants under various combinations of light and temperature revealed that phyB is physiologically responsive to both signals. We therefore propose that in addition to its photoreceptor functions, phyB is a temperature sensor in plants.
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              Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for shade avoidance in plants.

              Plants grown at high densities perceive a decrease in the red to far-red (R:FR) ratio of incoming light, resulting from absorption of red light by canopy leaves and reflection of far-red light from neighboring plants. These changes in light quality trigger a series of responses known collectively as the shade avoidance syndrome. During shade avoidance, stems elongate at the expense of leaf and storage organ expansion, branching is inhibited, and flowering is accelerated. We identified several loci in Arabidopsis, mutations in which lead to plants defective in multiple shade avoidance responses. Here we describe TAA1, an aminotransferase, and show that TAA1 catalyzes the formation of indole-3-pyruvic acid (IPA) from L-tryptophan (L-Trp), the first step in a previously proposed, but uncharacterized, auxin biosynthetic pathway. This pathway is rapidly deployed to synthesize auxin at the high levels required to initiate the multiple changes in body plan associated with shade avoidance.
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                Author and article information

                Contributors
                christian.fankhauser@unil.ch
                Journal
                New Phytol
                New Phytol
                10.1111/(ISSN)1469-8137
                NPH
                The New Phytologist
                John Wiley and Sons Inc. (Hoboken )
                0028-646X
                1469-8137
                29 November 2019
                April 2020
                : 226
                : 1 ( doiID: 10.1111/nph.v226.1 )
                : 50-58
                Affiliations
                [ 1 ] Faculty of Biology and Medicine Centre for Integrative Genomics University of Lausanne Génopode Building Lausanne CH‐1015 Switzerland
                Author notes
                [*] [* ] Author for correspondence:

                Christian Fankhauser

                Tel: +41 21 692 3941

                Email: christian.fankhauser@ 123456unil.ch

                [†]

                These authors contributed equally to this work (listed alphabetically).

                Author information
                https://orcid.org/0000-0002-3254-5967
                https://orcid.org/0000-0002-0973-222X
                https://orcid.org/0000-0002-4395-8599
                https://orcid.org/0000-0001-8698-4722
                https://orcid.org/0000-0002-9074-5350
                https://orcid.org/0000-0002-6610-6954
                https://orcid.org/0000-0003-4719-5901
                Article
                NPH16316 2019-30650
                10.1111/nph.16316
                7064998
                31705802
                223c867b-5afb-459b-a960-83e6d6104f6a
                © 2019 The Authors. New Phytologist © 2019 New Phytologist Trust

                This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                History
                : 16 July 2019
                : 05 November 2019
                Page count
                Figures: 4, Tables: 0, Pages: 9, Words: 6532
                Funding
                Funded by: University of Lausanne , open-funder-registry 10.13039/501100006390;
                Funded by: Swiss National Science Foundation , open-funder-registry 10.13039/501100001711;
                Award ID: 310030B_179558
                Award ID: CRSII3_154438
                Funded by: EMBO , open-funder-registry 10.13039/100004410;
                Award ID: ALTF 293‐2013
                Categories
                Rapid Report
                Research
                Rapid Reports
                Custom metadata
                2.0
                April 2020
                Converter:WILEY_ML3GV2_TO_JATSPMC version:5.7.7 mode:remove_FC converted:11.03.2020

                Plant science & Botany
                arabidopsis thaliana,auxin,pif4,pif7,thermomorphogenesis
                Plant science & Botany
                arabidopsis thaliana, auxin, pif4, pif7, thermomorphogenesis

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