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      Community structure and functional group of root‐associated Fungi of Pinus sylvestris var. mongolica across stand ages in the Mu Us Desert

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          Abstract

          Root‐associated fungi (RAF) are an important factor affecting the host's growth, and their contribution to Pinus sylvestris var. mongolica plantation decline is substantial. Therefore, we selected three age groups of P. sylvestris plantations (26, 33, and 43 years), in the Mu Us Desert, to characterize the community structure and functional groups of RAF, identified by Illumina high‐throughput sequencing and FUNGuild platform, respectively. The effects of soil properties and enzyme activities on fungal diversity and functional groups were also examined. The results indicated that (a) 805 operational taxonomic units of RAF associated with P. sylvestris belonged to six phyla and 163 genera. Diversity and richness were not significantly different in the three age groups, but community composition showed significant differences. Ascomycota and Basidiomycota dominated the fungal community, while Rhizopogon dominated in each plot. (b) The proportion of pathotrophs decreased with increasing age, while that of symbiotrophs increased sharply, which were mainly represented by ectomycorrhizal fungi. (c) Stand age and soil enzyme activity had a greater influence on fungal community composition than did soil properties, whereas environmental variables were not significantly correlated with fungal diversity and richness. Dynamics of fungal community composition and functional groups with the aging plantations reflected the growth state of P. sylvestris and were related to plantation degradation.

          Abstract

          In this article, the community structure and functional groups of root‐associated fungi of Pinus sylvestris var. mongolica plantations with different stand age (26, 33 and 43 years) in the Mu Us Desert were identified by Illumina high‐throughput sequencing and FUNGuild platform. Dynamics of fungal community composition and functional groups with the ageing plantations reflected the growth state of P. sylvestris and were related to plantation degradation.

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          Diversity and host range of foliar fungal endophytes: are tropical leaves biodiversity hotspots?

          Fungal endophytes are found in asymptomatic photosynthetic tissues of all major lineages of land plants. The ubiquity of these cryptic symbionts is clear, but the scale of their diversity, host range, and geographic distributions are unknown. To explore the putative hyperdiversity of tropical leaf endophytes, we compared endophyte communities along a broad latitudinal gradient from the Canadian arctic to the lowland tropical forest of central Panama. Here, we use molecular sequence data from 1403 endophyte strains to show that endophytes increase in incidence, diversity, and host breadth from arctic to tropical sites. Endophyte communities from higher latitudes are characterized by relatively few species from many different classes of Ascomycota, whereas tropical endophyte assemblages are dominated by a small number of classes with a very large number of endophytic species. The most easily cultivated endophytes from tropical plants have wide host ranges, but communities are dominated by a large number of rare species whose host range is unclear. Even when only the most easily cultured species are considered, leaves of tropical trees represent hotspots of fungal species diversity, containing numerous species not yet recovered from other biomes. The challenge remains to recover and identify those elusive and rarely cultured taxa with narrower host ranges, and to elucidate the ecological roles of these little-known symbionts in tropical forests.
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            Hidden fungi, emergent properties: endophytes and microbiomes.

            Endophytes are microorganisms that live within plant tissues without causing symptoms of disease. They are important components of plant microbiomes. Endophytes interact with, and overlap in function with, other core microbial groups that colonize plant tissues, e.g., mycorrhizal fungi, pathogens, epiphytes, and saprotrophs. Some fungal endophytes affect plant growth and plant responses to pathogens, herbivores, and environmental change; others produce useful or interesting secondary metabolites. Here, we focus on new techniques and approaches that can provide an integrative understanding of the role of fungal endophytes in the plant microbiome. Clavicipitaceous endophytes of grasses are not considered because they have unique properties distinct from other endophytes. Hidden from view and often overlooked, endophytes are emerging as their diversity, importance for plant growth and survival, and interactions with other organisms are revealed. Copyright © 2011 by Annual Reviews. All rights reserved.
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              Root exudates regulate soil fungal community composition and diversity.

              Plants are in constant contact with a community of soil biota that contains fungi ranging from pathogenic to symbiotic. A few studies have demonstrated a critical role of chemical communication in establishing highly specialized relationships, but the general role for root exudates in structuring the soil fungal community is poorly described. This study demonstrates that two model plant species (Arabidopsis thaliana and Medicago truncatula) are able to maintain resident soil fungal populations but unable to maintain nonresident soil fungal populations. This is mediated largely through root exudates: the effects of adding in vitro-generated root exudates to the soil fungal community were qualitatively and quantitatively similar to the results observed for plants grown in those same soils. This effect is observed for total fungal biomass, phylotype diversity, and overall community similarity to the starting community. Nonresident plants and root exudates influenced the fungal community by both positively and negatively impacting the relative abundance of individual phylotypes. A net increase in fungal biomass was observed when nonresident root exudates were added to resident plant treatments, suggesting that increases in specific carbon substrates and/or signaling compounds support an increased soil fungal population load. This study establishes root exudates as a mechanism through which a plant is able to regulate soil fungal community composition.
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                Author and article information

                Contributors
                gaoguanglei@bjfu.edu.cn
                Journal
                Ecol Evol
                Ecol Evol
                10.1002/(ISSN)2045-7758
                ECE3
                Ecology and Evolution
                John Wiley and Sons Inc. (Hoboken )
                2045-7758
                19 February 2020
                March 2020
                : 10
                : 6 ( doiID: 10.1002/ece3.v10.6 )
                : 3032-3042
                Affiliations
                [ 1 ] Yanchi Research Station School of Soil and Water Conservation Beijing Forestry University Beijing China
                [ 2 ] Key Laboratory of State Forestry and Grassland Administration on Soil and Water Conservation Beijing China
                [ 3 ] Engineering Research Center of Forestry Ecological Engineering Ministry of Education Beijing Forestry University Beijing China
                Author notes
                [*] [* ] Correspondence

                Guang‐lei Gao, Yanchi Research Station, School of Soil and Water Conservation, Beijing Forestry University, Beijing 100083, China.

                Email: gaoguanglei@ 123456bjfu.edu.cn

                Author information
                https://orcid.org/0000-0002-0486-1532
                Article
                ECE36119
                10.1002/ece3.6119
                7083681
                32211174
                2e85cbf7-452b-47fe-96c7-b8d3cd43ba9b
                © 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                History
                : 26 November 2019
                : 29 January 2020
                : 30 January 2020
                Page count
                Figures: 3, Tables: 4, Pages: 11, Words: 8648
                Funding
                Funded by: Fundamental Research Funds for the Central Universities
                Award ID: 2017PT03
                Award ID: 2015ZCQ‐SB‐02
                Funded by: National Natural Science Foundation of China , open-funder-registry 10.13039/501100001809;
                Award ID: 31600583
                Funded by: National Key Research and Development Program of China
                Award ID: 2018YFC0507101
                Categories
                Original Research
                Original Research
                Custom metadata
                2.0
                March 2020
                Converter:WILEY_ML3GV2_TO_JATSPMC version:5.7.8 mode:remove_FC converted:20.03.2020

                Evolutionary Biology
                ectomycorrhizal fungi,pathogenic fungi,pinus sylvestris var. mongolica,saprotrophic fungi,soil property,stand age,the mu us desert

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