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      Sporadic and Familial Congenital Cataracts: Mutational Spectrum and New Diagnoses Using Next‐Generation Sequencing

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          ABSTRACT

          Congenital cataracts are a significant cause of lifelong visual loss. They may be isolated or associated with microcornea, microphthalmia, anterior segment dysgenesis (ASD) and glaucoma, and there can be syndromic associations. Genetic diagnosis is challenging due to marked genetic heterogeneity. In this study, next‐generation sequencing (NGS) of 32 cataract‐associated genes was undertaken in 46 apparently nonsyndromic congenital cataract probands, around half sporadic and half familial cases. We identified pathogenic variants in 70% of cases, and over 68% of these were novel. In almost two‐thirds (20/33) of these cases, this resulted in new information about the diagnosis and/or inheritance pattern. This included identification of: new syndromic diagnoses due to NHS or BCOR mutations; complex ocular phenotypes due to PAX6 mutations; de novo autosomal‐dominant or X‐linked mutations in sporadic cases; and mutations in two separate cataract genes in one family. Variants were found in the crystallin and gap junction genes, including the first report of severe microphthalmia and sclerocornea associated with a novel GJA8 mutation. Mutations were also found in rarely reported genes including MAF, VIM, MIP, and BFSP1. Targeted NGS in presumed nonsyndromic congenital cataract patients provided significant diagnostic information in both familial and sporadic cases.

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          Most cited references56

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          dbSNP: a database of single nucleotide polymorphisms.

          In response to a need for a general catalog of genome variation to address the large-scale sampling designs required by association studies, gene mapping and evolutionary biology, the National Cancer for Biotechnology Information (NCBI) has established the dbSNP database. Submissions to dbSNP will be integrated with other sources of information at NCBI such as GenBank, PubMed, LocusLink and the Human Genome Project data. The complete contents of dbSNP are available to the public at website: http://www.ncbi.nlm.nih.gov/SNP. Submitted SNPs can also be downloaded via anonymous FTP at ftp://ncbi.nlm.nih.gov/snp/
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            Congenital cataracts and their molecular genetics.

            Cataract can be defined as any opacity of the crystalline lens. Congenital cataract is particularly serious because it has the potential for inhibiting visual development, resulting in permanent blindness. Inherited cataracts represent a major contribution to congenital cataracts, especially in developed countries. While cataract represents a common end stage of mutations in a potentially large number of genes acting through varied mechanisms in practice most inherited cataracts have been associated with a subgroup of genes encoding proteins of particular importance for the maintenance of lens transparency and homeostasis. The increasing availability of more detailed information about these proteins and their functions and is making it possible to understand the pathophysiology of cataracts and the biology of the lens in general.
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              Cat-Map: putting cataract on the map

              Lens opacities, or cataract(s), may be inherited as a classic Mendelian disorder usually with early-onset or, more commonly, acquired with age as a multi-factorial or complex trait. Many genetic forms of cataract have been described in mice and other animal models. Considerable progress has been made in mapping and identifying the genes and mutations responsible for inherited forms of cataract, and genetic determinants of age-related cataract are beginning to be discovered. To provide a convenient and accurate summary of current information focused on the increasing genetic complexity of Mendelian and age-related cataract we have created an online chromosome map and reference database for cataract in humans and mice (Cat-Map).
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                Author and article information

                Journal
                Hum Mutat
                Hum. Mutat
                10.1002/(ISSN)1098-1004
                HUMU
                Human Mutation
                John Wiley and Sons Inc. (Hoboken )
                1059-7794
                1098-1004
                14 January 2016
                April 2016
                : 37
                : 4 ( doiID: 10.1002/humu.2016.37.issue-4 )
                : 371-384
                Affiliations
                [ 1 ] Eye Genetics Research The Children's Hospital at Westmead Save Sight Institute Children's Medical Research InstituteUniversity of Sydney Sydney New South WalesAustralia
                [ 2 ] Department of Clinical GeneticsThe Children's Hospital at Westmead Sydney New South WalesAustralia
                [ 3 ] Western Sydney Genetics ProgramThe Children's Hospital at Westmead Sydney New South WalesAustralia
                [ 4 ] Discipline of Paediatrics and Child Health and Discipline of Genetic Medicine Sydney Medical SchoolUniversity of Sydney New South WalesAustralia
                [ 5 ] Department of OphthalmologyThe Children's Hospital at Westmead Sydney New South WalesAustralia
                [ 6 ] Discipline of Ophthalmology Sydney Medical SchoolUniversity of Sydney New South WalesAustralia
                [ 7 ] Department of Molecular GeneticsThe Children's Hospital at Westmead Sydney New South Wales Australia
                [ 8 ] Department of Medical GeneticsSydney Children's Hospital Sydney New South WalesAustralia
                Author notes
                [*] [* ]Correspondence to: Robyn V. Jamieson, Eye Genetics Research, The Children's Hospital at Westmead, Save Sight Institute, and Children's Medical Research Institute, University of Sydney, Sydney, New South Wales 2145, Australia. E‐mail: rjamieson@ 123456cmri.org.au
                Article
                HUMU22948
                10.1002/humu.22948
                4787201
                26694549
                3fc809ae-ffee-41e9-8c1c-2e266b8e3aca
                © 2015 The Authors. ** Human Mutation published by Wiley Periodicals, Inc.

                This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial‐NoDerivs License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.

                History
                : 17 September 2015
                : 14 December 2015
                Page count
                Pages: 14
                Funding
                Funded by: Ophthalmic Research Institute of Australia
                Categories
                Research Article
                Research Articles
                Custom metadata
                2.0
                humu22948
                April 2016
                Converter:WILEY_ML3GV2_TO_NLMPMC version:4.8.5 mode:remove_FC converted:11.03.2016

                Human biology
                next‐generation sequencing,congenital cataract,microcornea,microphthalmia,eye
                Human biology
                next‐generation sequencing, congenital cataract, microcornea, microphthalmia, eye

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