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      CircRNA AFF4 induced by KDM1A promotes osteogenic differentiation through FNDC5/Irisin pathway

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          Abstract

          Background

          Circular RNA (circ) AFF4 was documented to regulate osteogenesis but the underlying mechanism remains to be elucidated. The preliminary study showed that circ_AFF4 may promote osteogenesis via FNDC5/Irisin. Furthermore, the online prediction tool indicated the interaction of circ_AFF4, insulin-like growth factor-2 mRNA-binding protein 3 (IGF2BP3), FNDC5 and lysine (K)-specific demethylase 1 A (KDM1A). Therefore, this study aims to elucidate the relationships of KDM1A, circ_AFF4, IGF2BP3 and FNDC5/Irisin during osteogenesis.

          Methods

          The alkaline phosphatase (ALP) activities and osteogenic-related factors were determined using ALP and alizarin red S (ARS) staining, real-time quantitative PCR(RT-qPCR) and western blot. Immunoprecipitation (RIP), pull-down assay and fluorescence in situ hybridization (FISH) were used to examine the interactions among circ_AFF4/IGF2BP3/FNDC5. A mouse in vivo model was utilized to further confirm the regulatory effect on bone formation.

          Results

          Circ_AFF4 and KDM1A expression levels were increased during osteoinduction of BM-MSCs. Knockdown of circ_AFF4 and KDM1A significantly suppressed BM-MSC osteogenesis. We also proved that KDM1A directly bound to circ_AFF4 and FNDC5 promoter and induced circ_AFF4 and FNDC5 expression. Furthermore, circ_AFF4 enhanced the stability of FNDC5 by generating a circ_AFF4, IGF2BP3 and FNDC5 RNA-protein complex, and thereby induced Irisin and osteogenesis. The in vitro data was confirmed with in vivo model.

          Conclusion

          These findings elucidate that KDM1A induces circ_AFF4, which promotes promote osteogenesis via IGF2BP3. This study indicates that circ_AFF4 may potentially represent a critical therapeutic target for the diseases.

          Supplementary Information

          The online version contains supplementary material available at 10.1186/s10020-022-00557-7.

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          Most cited references31

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          CircRNA: functions and properties of a novel potential biomarker for cancer

          Circular RNAs, a novel class of endogenous noncoding RNAs, are characterized by their covalently closed loop structures without a 5′ cap or a 3′ Poly A tail. Although the mechanisms of circular RNAs’ generation and function are not fully clear, recent research has shown that circular RNAs may function as potential molecular markers for disease diagnosis and treatment and play an important role in the initiation and progression of human diseases, especially in tumours. This review summarizes some information about categories, biogenesis, functions at the molecular level, properties of circular RNAs and the possibility of circular RNAs as biomarkers in cancers.
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            Circular RNAs Act as miRNA Sponges.

            Majority of RNAs expressed in animal cells lack protein-coding ability. Unlike other cellular RNAs, circular (circ)RNAs include a large family of noncoding (nc)RNAs that lack the 5' or 3' ends. The improvements in high-throughput RNA sequencing and novel bioinformatics tools have led to the identification of thousands of circRNAs in various organisms. CircRNAs can regulate gene expression by influencing the transcription, the mRNA turnover, and translation by sponging RNA-binding proteins and microRNAs. Given the broad impact of circRNA on miRNA activity, there is huge interest in understanding the impact of miRNA sponging by circRNA on gene regulation. In this review, we summarize our current knowledge of the miRNA-circRNA interaction and mechanisms that influence gene expression.
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              Circular RNA: metabolism, functions and interactions with proteins

              Circular RNAs (CircRNAs) are single-stranded, covalently closed RNA molecules that are ubiquitous across species ranging from viruses to mammals. Important advances have been made in the biogenesis, regulation, localization, degradation and modification of circRNAs. CircRNAs exert biological functions by acting as transcriptional regulators, microRNA (miR) sponges and protein templates. Moreover, emerging evidence has revealed that a group of circRNAs can serve as protein decoys, scaffolds and recruiters. However, the existing research on circRNA-protein interactions is quite limited. Hence, in this review, we briefly summarize recent progress in the metabolism and functions of circRNAs and elaborately discuss the patterns of circRNA-protein interactions, including altering interactions between proteins, tethering or sequestering proteins, recruiting proteins to chromatin, forming circRNA-protein-mRNA ternary complexes and translocating or redistributing proteins. Many discoveries have revealed that circRNAs have unique expression signatures and play crucial roles in a variety of diseases, enabling them to potentially act as diagnostic biomarkers and therapeutic targets. This review systematically evaluates the roles and mechanisms of circRNAs, with the hope of advancing translational medicine involving circRNAs.
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                Author and article information

                Contributors
                ink2000_2000@sina.com
                Journal
                Mol Med
                Mol Med
                Molecular Medicine
                BioMed Central (London )
                1076-1551
                1528-3658
                18 November 2022
                18 November 2022
                2022
                : 28
                : 134
                Affiliations
                [1 ]GRID grid.412017.1, ISNI 0000 0001 0266 8918, The First Affiliated Hospital, Department of Orthopedics, , Hengyang Medical School, University of South China, ; No. 69 Chuanshan Road, Hengyang, Hunan 421001 China
                [2 ]GRID grid.412017.1, ISNI 0000 0001 0266 8918, The First Affiliated Hospital, Department of Spine, , Hengyang Medical School, University of South China, ; No. 69 Chuanshan Road, Hengyang, Hunan 421001 China
                [3 ]GRID grid.216417.7, ISNI 0000 0001 0379 7164, Department of Orthopedics, Xiangya Hospital, , Central South University, ; No.87 Xiangya Road, 410008 Changsha, Hunan China
                [4 ]GRID grid.412017.1, ISNI 0000 0001 0266 8918, Hengyang Medical School, , University of South China, ; Hengyang, Hunan 421001, China
                Author information
                http://orcid.org/0000-0002-8196-1377
                Article
                557
                10.1186/s10020-022-00557-7
                9673395
                36401176
                495d74f7-9926-44f0-bb0b-501ae88247aa
                © The Author(s) 2022

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 10 June 2022
                : 8 October 2022
                : 13 October 2022
                Funding
                Funded by: 2020 Education Reform Project of University of South China
                Award ID: No. 2020YB-XJG107
                Award Recipient :
                Funded by: 2021 College Student Innovation and Entrepreneurship Training Program Project of University of South China
                Award ID: No. X202110555513
                Award Recipient :
                Categories
                Research Article
                Custom metadata
                © The Author(s) 2022

                circular rna aff4,kdm1a,osteogenic differentiation,fndc5,irisin

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