Glycopeptides were isolated from bovine fetuin after digestion with Pronase, aminopeptidase
M, and carboxypeptidase Y. The glycopeptides were derivatized with tert-butyloxycarbonyltyrosine
and separated on the basis of peptide by using reverse-phase high-performance liquid
chromatography. Using 400-MHz 1H NMR, the asialotriantennary oligosaccharides at each
of the three N-linked glycosylation sites were found to be combinations of the following
two structures in which the third branch is either Gal beta(1,4)GlcNAc or Gal beta(1,3)GlcNAc:
(formula; see text) The asialotriantennary glycopeptides containing all beta(1,4)-lactosamine
as the branches were designated Gal beta(1,4)GlcNAc-TRI while triantennary glycopeptides
containing beta(1,3)-lactosamine as branch III were termed Gal beta(1,3)GlcNAc-TRI.
The Gal beta(1,3)GlcNAc unit was localized predominantly to the branch III arm on
the basis of a downfield shift (-0.027 ppm) in the H-1 and upfield shift (0.01 ppm)
in the NAc methyl signals from the branch III GlcNAc resulting from Gal beta(1,3)
instead of Gal beta(1,4) substitution. Revised assignments are proposed for the H-1's
of Gal residues 6 (delta 4.464) and 8 (delta 4.471) [Vliegenthart, J. F. G., Dorland,
L., & van Halbeek, H. (1983) Adv. Carbohydr. Chem. Biochem. 41, 209-373] in a Gal
beta(1,4)GlcNAc-TRI. The proportion of Gal beta(1,3)GlcNAc-TRI glycopeptides from
the Asn-Asp, Asn-Gly, and Asn-Cys sites was found to be 40%, 60%, and 20%, respectively.
Analysis of the binding of these glycopeptides, containing from 20% to 60% Gal beta(1,3)GlcNAc
as branch III, to rabbit hepatocytes revealed that the greater the proportion of Gal
beta(1,3)GlcNAc, the lower the affinity of the mixture. The Kd for Gal beta(1,4)GlcNAc-TRI
was found to be between 3.6 and 5.4 nM (P = 0.10) with a mean of 4.4 nM from binding
data analyzed by using the LIGAND program [Munson, P. J., & Rodbard, D. (1980) Anal.
Biochem. 107, 220-239] and computer simulations of the binding of two ligands as a
mixture to one receptor site. The Kd of Gal beta(1,3)GlcNAc-TRI oligosaccharide, prepared
by hydrazinolysis, was found to be 305 nM from inhibition studies.