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      Cytological and morphological analysis of hybrids between Brassicoraphanus, and Brassica napus for introgression of clubroot resistant trait into Brassica napus L

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          Abstract

          Interspecific hybridization is a powerful tool for improvement of crop species, it has the potential to broaden the genetic base and create new plant forms for breeding programs. Synthetic allopolyploid is a widely-used model for the study of genetic recombination and fixed heterosis in Brassica. In Brassica napus breeding, identification and introgression of new sources of clubroot resistance trait from wild or related species into it by hybridization is a long-term crop management strategy for clubroot disease. Radish ( Raphanus sativus L.) is a close relative of the Brassica and most radish accessions are immune to the clubroot disease. A synthesized allotetraploid Brassicoraphanus (RRCC, 2n = 36) between R. sativus cv. HQ-04 (2n = 18, RR) and Brassica oleracea var. alboglabra (L.H Bailey) (2n = 18, CC) proved resistant of multiple clubroot disease pathogen P. brassicae. To predict the possibility to transfer the clubroot resistance trait from the RR subgenome of allotetraploid Brassicoraphanus (RRCC, 2n = 36) into Brassica napus (AACC, 2n = 38), we analyzed the frequency of chromosome pairings in the F 1 hybrids produced from a cross between B. napus cv. HS5 and the allotetraploid, characterize the genomic composition of some backcrossed progeny (BC 1) using GISH, BAC-FISH and AFLP techniques. The level of intergenomic pairing between A and R genomes in the F 1 hybrid was high, allosyndetic bivalents formed in 73.53% PMCs indicative of significant level of homeologous recombination between two genomes and high probability of incorporating chromosomal segments/genes from R-genome into A/C-genomes. The BC 1 plants inherited variant extra R chromosomes or fragments from allotetraploid as revealed by GISH and AFLP analysis. 13.51% BC 2 individuals were resistant to clubroot disease, and several resistance lines had high pollen fertility, Overall, the genetic material presented in this work represents a potential new genetic resource for practical use in breeding B. napus clubroot resistant cultivars.

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          AFLP: a new technique for DNA fingerprinting.

          A novel DNA fingerprinting technique called AFLP is described. The AFLP technique is based on the selective PCR amplification of restriction fragments from a total digest of genomic DNA. The technique involves three steps: (i) restriction of the DNA and ligation of oligonucleotide adapters, (ii) selective amplification of sets of restriction fragments, and (iii) gel analysis of the amplified fragments. PCR amplification of restriction fragments is achieved by using the adapter and restriction site sequence as target sites for primer annealing. The selective amplification is achieved by the use of primers that extend into the restriction fragments, amplifying only those fragments in which the primer extensions match the nucleotides flanking the restriction sites. Using this method, sets of restriction fragments may be visualized by PCR without knowledge of nucleotide sequence. The method allows the specific co-amplification of high numbers of restriction fragments. The number of fragments that can be analyzed simultaneously, however, is dependent on the resolution of the detection system. Typically 50-100 restriction fragments are amplified and detected on denaturing polyacrylamide gels. The AFLP technique provides a novel and very powerful DNA fingerprinting technique for DNAs of any origin or complexity.
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            Status and Perspectives of Clubroot Resistance Breeding in Crucifer Crops

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              Identification of two loci for resistance to clubroot (Plasmodiophora brassicae Woronin) in Brassica rapa L.

              In an analysis of 114 F(2) individuals from a cross between clubroot-resistant and susceptible lines of Brassica rapa L., 'G004' and 'Hakusai Chukanbohon Nou 7' (A9709), respectively, we identified two loci, Crr1 and Crr2, for clubroot (caused by Plasmodiophora brassicae Woronin) resistance. Each locus segregated independently among the F(2) population, indicating that the loci reside on a different region of chromosomes or on different chromosomes. Genetic analysis showed that each locus had little effect on clubroot resistance by itself, indicating that these two loci are complementary for clubroot resistance. The resistance to clubroot was much stronger when both loci were homozygous for resistant alleles than when they were heterozygous. These results indicate that clubroot resistance in B. rapa is under oligogenic control and at least two loci are necessary for resistance.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, CA USA )
                1932-6203
                15 May 2017
                2017
                : 12
                : 5
                : e0177470
                Affiliations
                [1 ]National Research Center of Rapeseed Engineering and Technology and College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
                [2 ]College of Life Science, Guizhou Normal University, Guiyang, China
                [3 ]Crop Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China
                [4 ]Department of Horticulture, Shenyang Agricultural University, Shenyang, China
                [5 ]Yichang Academy of Agriculture Science, Yichang, China
                Agriculture and Agri-Food Canada, CANADA
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                • Conceptualization: CZ.

                • Data curation: ZZ CCN.

                • Formal analysis: ZZ CCN.

                • Funding acquisition: CZ.

                • Investigation: ZZ ZH JG BZ YJ YT.

                • Methodology: ZZ CZ.

                • Project administration: CL CZ.

                • Resources: JW ZP.

                • Supervision: CZ.

                • Writing – original draft: CCN ZZ.

                • Writing – review & editing: CCN YZ CL CZ.

                Article
                PONE-D-16-43993
                10.1371/journal.pone.0177470
                5432170
                28505203
                6f0befd5-8d88-44ed-849d-38ce7b217851
                © 2017 Zhan et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 5 November 2016
                : 27 April 2017
                Page count
                Figures: 6, Tables: 3, Pages: 17
                Funding
                Funded by: National Key Research and Development Program of China
                Award ID: No.2016YFD0101300
                Award Recipient :
                This work was supported by the grants from the National Key Research and Development Program of China (no. 2016YFD0101300), Special Fund for Agroscientific Research in the Public Interest (201203026-6), Technological innovation project of HuBei (2016ABA084), and China Agriculture Research System (nycytx00503).
                Categories
                Research Article
                Biology and Life Sciences
                Cell Biology
                Chromosome Biology
                Chromosomes
                Biology and Life Sciences
                Plant Science
                Plant Anatomy
                Pollen
                Biology and Life Sciences
                Organisms
                Plants
                Brassica
                Biology and Life Sciences
                Cell Biology
                Chromosome Biology
                Chromosomes
                Chromosome Pairs
                Biology and Life Sciences
                Organisms
                Plants
                Brassica
                Radish
                Biology and Life Sciences
                Organisms
                Plants
                Vegetables
                Radish
                Biology and Life Sciences
                Molecular Biology
                Molecular Biology Techniques
                Artificial Gene Amplification and Extension
                Amplified Fragment Length Polymorphism
                Research and Analysis Methods
                Molecular Biology Techniques
                Artificial Gene Amplification and Extension
                Amplified Fragment Length Polymorphism
                Biology and Life Sciences
                Cell Biology
                Signal Transduction
                Cell Signaling
                Genomic Signal Processing
                Biology and Life Sciences
                Evolutionary Biology
                Evolutionary Processes
                Hybridization
                Custom metadata
                All relevant data are within the paper and its Supporting Information files.

                Uncategorized
                Uncategorized

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