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      From Compressed-Sensing to Artificial Intelligence-Based Cardiac MRI Reconstruction

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          Abstract

          Cardiac magnetic resonance (CMR) imaging is an important tool for the non-invasive assessment of cardiovascular disease. However, CMR suffers from long acquisition times due to the need of obtaining images with high temporal and spatial resolution, different contrasts, and/or whole-heart coverage. In addition, both cardiac and respiratory-induced motion of the heart during the acquisition need to be accounted for, further increasing the scan time. Several undersampling reconstruction techniques have been proposed during the last decades to speed up CMR acquisition. These techniques rely on acquiring less data than needed and estimating the non-acquired data exploiting some sort of prior information. Parallel imaging and compressed sensing undersampling reconstruction techniques have revolutionized the field, enabling 2- to 3-fold scan time accelerations to become standard in clinical practice. Recent scientific advances in CMR reconstruction hinge on the thriving field of artificial intelligence. Machine learning reconstruction approaches have been recently proposed to learn the non-linear optimization process employed in CMR reconstruction. Unlike analytical methods for which the reconstruction problem is explicitly defined into the optimization process, machine learning techniques make use of large data sets to learn the key reconstruction parameters and priors. In particular, deep learning techniques promise to use deep neural networks (DNN) to learn the reconstruction process from existing datasets in advance, providing a fast and efficient reconstruction that can be applied to all newly acquired data. However, before machine learning and DNN can realize their full potentials and enter widespread clinical routine for CMR image reconstruction, there are several technical hurdles that need to be addressed. In this article, we provide an overview of the recent developments in the area of artificial intelligence for CMR image reconstruction. The underlying assumptions of established techniques such as compressed sensing and low-rank reconstruction are briefly summarized, while a greater focus is given to recent advances in dictionary learning and deep learning based CMR reconstruction. In particular, approaches that exploit neural networks as implicit or explicit priors are discussed for 2D dynamic cardiac imaging and 3D whole-heart CMR imaging. Current limitations, challenges, and potential future directions of these techniques are also discussed.

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          Learning a variational network for reconstruction of accelerated MRI data

          To allow fast and high-quality reconstruction of clinical accelerated multi-coil MR data by learning a variational network that combines the mathematical structure of variational models with deep learning.
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              A Deep Cascade of Convolutional Neural Networks for Dynamic MR Image Reconstruction

              Inspired by recent advances in deep learning, we propose a framework for reconstructing dynamic sequences of 2-D cardiac magnetic resonance (MR) images from undersampled data using a deep cascade of convolutional neural networks (CNNs) to accelerate the data acquisition process. In particular, we address the case where data are acquired using aggressive Cartesian undersampling. First, we show that when each 2-D image frame is reconstructed independently, the proposed method outperforms state-of-the-art 2-D compressed sensing approaches, such as dictionary learning-based MR image reconstruction, in terms of reconstruction error and reconstruction speed. Second, when reconstructing the frames of the sequences jointly, we demonstrate that CNNs can learn spatio-temporal correlations efficiently by combining convolution and data sharing approaches. We show that the proposed method consistently outperforms state-of-the-art methods and is capable of preserving anatomical structure more faithfully up to 11-fold undersampling. Moreover, reconstruction is very fast: each complete dynamic sequence can be reconstructed in less than 10 s and, for the 2-D case, each image frame can be reconstructed in 23 ms, enabling real-time applications.
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                Author and article information

                Contributors
                Journal
                Front Cardiovasc Med
                Front Cardiovasc Med
                Front. Cardiovasc. Med.
                Frontiers in Cardiovascular Medicine
                Frontiers Media S.A.
                2297-055X
                25 February 2020
                2020
                : 7
                : 17
                Affiliations
                [1] 1Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London , London, United Kingdom
                [2] 2Escuela de Ingeniería, Pontificia Universidad Católica de Chile , Santiago, Chile
                Author notes

                Edited by: Steffen Erhard Petersen, Queen Mary University of London, United Kingdom

                Reviewed by: Reza Nezafat, Harvard University, United States; Michael Jerosch-Herold, Harvard Medical School, United States; Daniel K. Sodickson, New York University, United States

                *Correspondence: Niccolo Fuin niccolo.fuin@ 123456kcl.ac.uk

                This article was submitted to Cardiovascular Imaging, a section of the journal Frontiers in Cardiovascular Medicine

                †These authors have contributed equally to this work

                Article
                10.3389/fcvm.2020.00017
                7051921
                32158767
                829a78e7-e7df-4eca-88c5-8c01d8f861bf
                Copyright © 2020 Bustin, Fuin, Botnar and Prieto.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 30 September 2019
                : 31 January 2020
                Page count
                Figures: 9, Tables: 1, Equations: 6, References: 93, Pages: 19, Words: 12770
                Funding
                Funded by: Engineering and Physical Sciences Research Council 10.13039/501100000266
                Award ID: EP/P001009/
                Award ID: EP/P007619
                Award ID: EP/P032311/1
                Categories
                Cardiovascular Medicine
                Review

                cardiac mri,ai,reconstruction,dictionary learning,deep learning,undersampling

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