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      A temperature-inducible protein module for control of mammalian cell fate

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          Abstract

          Inducible protein switches are used throughout the biosciences to allow on-demand control of proteins in response to chemical or optical inputs. However, these inducers either cannot be controlled with precision in space and time or cannot be applied in optically dense settings, limiting their application in tissues and organisms. Here we introduce a protein module whose active state can be reversibly toggled with a small change in temperature, a stimulus that is both penetrant and dynamic. This protein, called Melt ( Membrane localization through temperature), exists as a monomer in the cytoplasm at elevated temperatures but both oligomerizes and translocates to the plasma membrane when temperature is lowered. Using custom devices for rapid and high-throughput temperature control during live-cell microscopy, we find that the original Melt variant fully switches states between 28–32°C, and state changes can be observed within minutes of temperature changes. Melt was highly modular, permitting thermal control over diverse intracellular processes including signaling, proteolysis, and nuclear shuttling through straightforward end-to-end fusions with no further engineering. Melt was also highly tunable, giving rise to a library of Melt variants with switch point temperatures ranging from 30–40°C. The variants with higher switch points allowed control of molecular circuits between 37°C-41°C, a well-tolerated range for mammalian cells. Finally, Melt could thermally regulate important cell decisions over this range, including cytoskeletal rearrangement and apoptosis. Thus Melt represents a versatile thermogenetic module that provides straightforward, temperature-based, real-time control of mammalian cells with broad potential for biotechnology and biomedicine.

          One-Sentence Summary:

          We introduce Melt, a protein whose activity can be toggled by a change in temperature of 3–4 degrees, and we demonstrate its ability to regulate a variety of protein and cell behaviors.

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            Going deeper than microscopy: the optical imaging frontier in biology.

            Optical microscopy has been a fundamental tool of biological discovery for more than three centuries, but its in vivo tissue imaging ability has been restricted by light scattering to superficial investigations, even when confocal or multiphoton methods are used. Recent advances in optical and optoacoustic (photoacoustic) imaging now allow imaging at depths and resolutions unprecedented for optical methods. These abilities are increasingly important to understand the dynamic interactions of cellular processes at different systems levels, a major challenge of postgenome biology. This Review discusses promising photonic methods that have the ability to visualize cellular and subcellular components in tissues across different penetration scales. The methods are classified into microscopic, mesoscopic and macroscopic approaches, according to the tissue depth at which they operate. Key characteristics associated with different imaging implementations are described and the potential of these technologies in biological applications is discussed.
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              Heat shock factors: integrators of cell stress, development and lifespan.

              Heat shock factors (HSFs) are essential for all organisms to survive exposures to acute stress. They are best known as inducible transcriptional regulators of genes encoding molecular chaperones and other stress proteins. Four members of the HSF family are also important for normal development and lifespan-enhancing pathways, and the repertoire of HSF targets has thus expanded well beyond the heat shock genes. These unexpected observations have uncovered complex layers of post-translational regulation of HSFs that integrate the metabolic state of the cell with stress biology, and in doing so control fundamental aspects of the health of the proteome and ageing.
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                Author and article information

                Journal
                bioRxiv
                BIORXIV
                bioRxiv
                Cold Spring Harbor Laboratory
                19 February 2024
                : 2024.02.19.581019
                Affiliations
                [1 ]Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA
                [2 ]Department of Biophysics, University of Pennsylvania, Philadelphia, PA, 19104, USA
                [3 ]Institute for Regenerative Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA
                [4 ]Abramson Cancer Center, University of Pennsylvania, Philadelphia, PA, 19104, USA
                Author notes
                [#]

                equal contribution

                Author Contributions

                W.B. and L.J.B. conceived the study to generate Melt and downstream applications and to develop the thermoPlate. W.B. generated Melt and its integration into molecular circuits. Z.H. discovered and characterized thermostable Melt variants, which were then integrated into circuits by Z.H. and W.B. W.B. developed and validated the thermoPlate. D.W. and T.R.M. validated cluster-induced cell killing. W.B., Z.H., and P.I. performed and analyzed all experiments. L.J.B. supervised the work. W.B., Z.H., and L.J.B. wrote the manuscript and made figures, with editing from all authors.

                [* ]corresponding author Contact Information bugaj@ 123456seas.upenn.edu
                Article
                10.1101/2024.02.19.581019
                10925237
                38464222
                8a734f82-1cef-4fcd-a87f-f93c8f6535bb

                This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License, which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.

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