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      Porcine cis-acting lnc-CAST positively regulates CXCL8 expression through histone H3K27ac

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          Abstract

          The chemokine CXCL8, also known as the neutrophil chemotactic factor, plays a crucial role in mediating inflammatory responses and managing cellular immune reactions during viral infections. Porcine reproductive and respiratory syndrome virus (PRRSV) primarily infects pulmonary alveolar macrophages (PAMs), leading to acute pulmonary infections. In this study, we explored a novel long non-coding RNA (lncRNA), termed lnc-CAST, situated within the Cxcl8 gene locus. This lncRNA was found to be highly expressed in porcine macrophages. We observed that both lnc-CAST and CXCL8 were significantly upregulated in PAMs following PRRSV infection, and after treatments with lipopolysaccharide (LPS) or lipoteichoic acid (LTA). Furthermore, we noticed a concurrent upregulation of lnc-CAST and CXCL8 expression in lungs of PRRSV-infected pigs. We then determined that lnc-CAST positively influenced CXCL8 expression in PAMs. Overexpression of lnc-CAST led to an increase in CXCL8 production, which in turn enhanced the migration of epithelial cells and the recruitment of neutrophils. Conversely, inhibiting lnc-CAST expression resulted in reduced CXCL8 production in PAMs, leading to decreased migration levels of epithelial cells and neutrophils. From a mechanistic perspective, we found that lnc-CAST, localized in the nucleus, facilitated the enrichment of histone H3K27ac in CXCL8 promoter region, thereby stimulating CXCL8 transcription in a cis-regulatory manner. In conclusion, our study underscores the pivotal critical role of lnc-CAST in regulating CXCL8 production, offering valuable insights into chemokine regulation and lung damage during PRRSV infection.

          Supplementary Information

          The online version contains supplementary material available at 10.1186/s13567-024-01296-9.

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          Most cited references58

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          Gene regulation by long non-coding RNAs and its biological functions

          Evidence accumulated over the past decade shows that long non-coding RNAs (lncRNAs) are widely expressed and have key roles in gene regulation. Recent studies have begun to unravel how the biogenesis of lncRNAs is distinct from that of mRNAs and is linked with their specific subcellular localizations and functions. Depending on their localization and their specific interactions with DNA, RNA and proteins, lncRNAs can modulate chromatin function, regulate the assembly and function of membraneless nuclear bodies, alter the stability and translation of cytoplasmic mRNAs and interfere with signalling pathways. Many of these functions ultimately affect gene expression in diverse biological and physiopathological contexts, such as in neuronal disorders, immune responses and cancer. Tissue-specific and condition-specific expression patterns suggest that lncRNAs are potential biomarkers and provide a rationale to target them clinically. In this Review, we discuss the mechanisms of lncRNA biogenesis, localization and functions in transcriptional, post-transcriptional and other modes of gene regulation, and their potential therapeutic applications.
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            COVID-19: immunopathology and its implications for therapy

            Xuetao Cao (2020)
            Severe coronavirus disease 2019 (COVID-19) is characterized by pneumonia, lymphopenia, exhausted lymphocytes and a cytokine storm. Significant antibody production is observed; however, whether this is protective or pathogenic remains to be determined. Defining the immunopathological changes in patients with COVID-19 provides potential targets for drug discovery and is important for clinical management.
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              Histone H3K27ac separates active from poised enhancers and predicts developmental state.

              Developmental programs are controlled by transcription factors and chromatin regulators, which maintain specific gene expression programs through epigenetic modification of the genome. These regulatory events at enhancers contribute to the specific gene expression programs that determine cell state and the potential for differentiation into new cell types. Although enhancer elements are known to be associated with certain histone modifications and transcription factors, the relationship of these modifications to gene expression and developmental state has not been clearly defined. Here we interrogate the epigenetic landscape of enhancer elements in embryonic stem cells and several adult tissues in the mouse. We find that histone H3K27ac distinguishes active enhancers from inactive/poised enhancer elements containing H3K4me1 alone. This indicates that the amount of actively used enhancers is lower than previously anticipated. Furthermore, poised enhancer networks provide clues to unrealized developmental programs. Finally, we show that enhancers are reset during nuclear reprogramming.
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                Author and article information

                Contributors
                zwl5561@163.com
                flzfulizhi@163.com
                vetyuewang@163.com
                Journal
                Vet Res
                Vet Res
                Veterinary Research
                BioMed Central (London )
                0928-4249
                1297-9716
                7 May 2024
                7 May 2024
                2024
                : 55
                : 56
                Affiliations
                [1 ]College of Veterinary Medicine, Southwest University, ( https://ror.org/01kj4z117) Chongqing, 400715 China
                [2 ]GRID grid.38587.31, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, ; Harbin, 150069 China
                [3 ]Chongqing Academy of Animal Science, ( https://ror.org/026mnhe80) Chongqing, 408599 China
                [4 ]National Center of Technology Innovation for Pigs, Chongqing, 402460 China
                Author notes

                Handling editor: Marie Galloux.

                Author information
                http://orcid.org/0000-0003-1575-3569
                Article
                1296
                10.1186/s13567-024-01296-9
                11077775
                38715098
                8b8f4b6e-0169-499c-8d6d-914e19737f2d
                © The Author(s) 2024

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

                History
                : 1 January 2024
                : 26 February 2024
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100012226, Fundamental Research Funds for the Central Universities;
                Award ID: SWU-KR22036
                Award Recipient :
                Categories
                Research Article
                Custom metadata
                © L’Institut National de Recherche en Agriculture, Alimentation et Environnement (INRAE) 2024

                Veterinary medicine
                cxcl8,lnc-cast,prrsv,chemokine regulation
                Veterinary medicine
                cxcl8, lnc-cast, prrsv, chemokine regulation

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