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      A review of instrumental variable estimators for Mendelian randomization

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          Abstract

          Instrumental variable analysis is an approach for obtaining causal inferences on the effect of an exposure (risk factor) on an outcome from observational data. It has gained in popularity over the past decade with the use of genetic variants as instrumental variables, known as Mendelian randomization. An instrumental variable is associated with the exposure, but not associated with any confounder of the exposure–outcome association, nor is there any causal pathway from the instrumental variable to the outcome other than via the exposure. Under the assumption that a single instrumental variable or a set of instrumental variables for the exposure is available, the causal effect of the exposure on the outcome can be estimated. There are several methods available for instrumental variable estimation; we consider the ratio method, two-stage methods, likelihood-based methods, and semi-parametric methods. Techniques for obtaining statistical inferences and confidence intervals are presented. The statistical properties of estimates from these methods are compared, and practical advice is given about choosing a suitable analysis method. In particular, bias and coverage properties of estimators are considered, especially with weak instruments. Settings particularly relevant to Mendelian randomization are prioritized in the paper, notably the scenario of a continuous exposure and a continuous or binary outcome.

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          An Introduction to the Bootstrap

          Statistics is a subject of many uses and surprisingly few effective practitioners. The traditional road to statistical knowledge is blocked, for most, by a formidable wall of mathematics. The approach in An Introduction to the Bootstrap avoids that wall. It arms scientists and engineers, as well as statisticians, with the computational techniques they need to analyze and understand complicated data sets.
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            'Mendelian randomization': can genetic epidemiology contribute to understanding environmental determinants of disease?

            Associations between modifiable exposures and disease seen in observational epidemiology are sometimes confounded and thus misleading, despite our best efforts to improve the design and analysis of studies. Mendelian randomization-the random assortment of genes from parents to offspring that occurs during gamete formation and conception-provides one method for assessing the causal nature of some environmental exposures. The association between a disease and a polymorphism that mimics the biological link between a proposed exposure and disease is not generally susceptible to the reverse causation or confounding that may distort interpretations of conventional observational studies. Several examples where the phenotypic effects of polymorphisms are well documented provide encouraging evidence of the explanatory power of Mendelian randomization and are described. The limitations of the approach include confounding by polymorphisms in linkage disequilibrium with the polymorphism under study, that polymorphisms may have several phenotypic effects associated with disease, the lack of suitable polymorphisms for studying modifiable exposures of interest, and canalization-the buffering of the effects of genetic variation during development. Nevertheless, Mendelian randomization provides new opportunities to test causality and demonstrates how investment in the human genome project may contribute to understanding and preventing the adverse effects on human health of modifiable exposures.
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              A Survey of Weak Instruments and Weak Identification in Generalized Method of Moments

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                Author and article information

                Journal
                Stat Methods Med Res
                Stat Methods Med Res
                SMM
                spsmm
                Statistical Methods in Medical Research
                SAGE Publications (Sage UK: London, England )
                0962-2802
                1477-0334
                17 August 2015
                October 2017
                : 26
                : 5 , Special issue: Cure Rate Modelling
                : 2333-2355
                Affiliations
                [1 ]Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK
                [2 ]Department of Statistics, The Wharton School, University of Pennsylvania, PA, USA
                Author notes
                [*]Stephen Burgess, Strangeways Research Laboratory, 2 Worts Causeway, Cambridge, CB1 8RN, UK. Email: sb452@ 123456medschl.cam.ac.uk .
                Article
                10.1177_0962280215597579
                10.1177/0962280215597579
                5642006
                26282889
                8d8ad135-f758-4040-be7d-ee99bc2627a7
                © The Author(s) 2015

                This article is distributed under the terms of the Creative Commons Attribution 3.0 License ( http://www.creativecommons.org/licenses/by/3.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages ( https://us.sagepub.com/en-us/nam/open-access-at-sage).

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                Regular Articles

                instrumental variable,comparison of methods,causal inference,weak instruments,finite-sample bias,mendelian randomization

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