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      Dynamic Transfer Learning for Named Entity Recognition

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          Abstract

          State-of-the-art named entity recognition (NER) systems have been improving continuously using neural architectures over the past several years. However, many tasks including NER require large sets of annotated data to achieve such performance. In particular, we focus on NER from clinical notes, which is one of the most fundamental and critical problems for medical text analysis. Our work centers on effectively adapting these neural architectures towards low-resource settings using parameter transfer methods. We complement a standard hierarchical NER model with a general transfer learning framework consisting of parameter sharing between the source and target tasks, and showcase scores significantly above the baseline architecture. These sharing schemes require an exponential search over tied parameter sets to generate an optimal configuration. To mitigate the problem of exhaustively searching for model optimization, we propose the Dynamic Transfer Networks (DTN), a gated architecture which learns the appropriate parameter sharing scheme between source and target datasets. DTN achieves the improvements of the optimized transfer learning framework with just a single training setting, effectively removing the need for exponential search.

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          Extracting medication information from clinical text.

          The Third i2b2 Workshop on Natural Language Processing Challenges for Clinical Records focused on the identification of medications, their dosages, modes (routes) of administration, frequencies, durations, and reasons for administration in discharge summaries. This challenge is referred to as the medication challenge. For the medication challenge, i2b2 released detailed annotation guidelines along with a set of annotated discharge summaries. Twenty teams representing 23 organizations and nine countries participated in the medication challenge. The teams produced rule-based, machine learning, and hybrid systems targeted to the task. Although rule-based systems dominated the top 10, the best performing system was a hybrid. Of all medication-related fields, durations and reasons were the most difficult for all systems to detect. While medications themselves were identified with better than 0.75 F-measure by all of the top 10 systems, the best F-measure for durations and reasons were 0.525 and 0.459, respectively. State-of-the-art natural language processing systems go a long way toward extracting medication names, dosages, modes, and frequencies. However, they are limited in recognizing duration and reason fields and would benefit from future research.
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            Morphological Priors for Probabilistic Neural Word Embeddings

            Word embeddings allow natural language processing systems to share statistical information across related words. These embeddings are typically based on distributional statistics, making it difficult for them to generalize to rare or unseen words. We propose to improve word embeddings by incorporating morphological information, capturing shared sub-word features. Unlike previous work that constructs word embeddings directly from morphemes, we combine morphological and distributional information in a unified probabilistic framework, in which the word embedding is a latent variable. The morphological information provides a prior distribution on the latent word embeddings, which in turn condition a likelihood function over an observed corpus. This approach yields improvements on intrinsic word similarity evaluations, and also in the downstream task of part-of-speech tagging.
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              Author and article information

              Journal
              13 December 2018
              Article
              1812.05288
              9394f185-d5dc-4b92-9ae6-64dd2c55d99c

              http://arxiv.org/licenses/nonexclusive-distrib/1.0/

              History
              Custom metadata
              AAAI 2019 Workshop on Health Intelligence
              cs.LG cs.CL stat.ML

              Theoretical computer science,Machine learning,Artificial intelligence
              Theoretical computer science, Machine learning, Artificial intelligence

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