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      Root Associated Bacillus sp. Improves Growth, Yield and Zinc Translocation for Basmati Rice ( Oryza sativa) Varieties

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          Abstract

          Plant associated rhizobacteria prevailing in different agro-ecosystems exhibit multiple traits which could be utilized in various aspect of sustainable agriculture. Two hundred thirty four isolates were obtained from the roots of basmati-385 and basmati super rice varieties growing in clay loam and saline soil at different locations of Punjab (Pakistan). Out of 234 isolates, 27 were able to solubilize zinc (Zn) from different Zn ores like zinc phosphate [Zn 3 (PO 4) 2], zinc carbonate (ZnCO 3) and zinc oxide (ZnO). The strain SH-10 with maximum Zn solubilization zone of 24 mm on Zn 3 (PO 4) 2ore and strain SH-17 with maximum Zn solubilization zone of 14–15 mm on ZnO and ZnCO 3ores were selected for further studies. These two strains solubilized phosphorous (P) and potassium (K) in vitro with a solubilization zone of 38–46 mm and 47–55 mm respectively. The strains also suppressed economically important rice pathogens Pyricularia oryzae and Fusarium moniliforme by 22–29% and produced various biocontrol determinants in vitro. The strains enhanced Zn translocation toward grains and increased yield of basmati-385 and super basmati rice varieties by 22–49% and 18–47% respectively. The Zn solubilizing strains were identified as Bacillus sp. and Bacillus cereus by 16S rRNA gene analysis.

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          Microbial interactions in the rhizosphere: beneficial influences of plant growth-promoting rhizobacteria on nutrient acquisition process. A review

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            Applications of free living plant growth-promoting rhizobacteria.

            Free-living plant growth-promoting rhizobacteria (PGPR) can be used in a variety of ways when plant growth enhancements are required. The most intensively researched use of PGPR has been in agriculture and horticulture. Several PGPR formulations are currently available as commercial products for agricultural production. Recently developing areas of PGPR usage include forest regeneration and phytoremediation of contaminated soils. As the mechanisms of plant growth promotion by these bacteria are unravelled, the possibility of more efficient plant-bacteria pairings for novel and practical uses will follow. The progress to date in using PGPR in a variety of applications with different plants is summarized and discussed here.
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              Biocontrol mechanism by root-associated Bacillus amyloliquefaciens FZB42 – a review

              Bacillus amyloliquefaciens subsp. plantarum FZB42 is a Gram-positive model bacterium for unraveling plant–microbe interactions in Bacilli. In addition, FZB42 is used commercially as biofertilizer and biocontrol agent in agriculture. Genome analysis of FZB42 revealed that nearly 10% of the FZB42 genome is devoted to synthesizing antimicrobial metabolites and their corresponding immunity genes. However, recent investigations in planta demonstrated that – except surfactin – the amount of such compounds found in vicinity of plant roots is relatively low, making doubtful a direct function in suppressing competing microflora including plant pathogens. These metabolites have been also suspected to induce changes within the rhizosphere microbial community, which might affect environment and plant health. However, sequence analysis of rhizosphere samples revealed only marginal changes in the root microbiome, suggesting that secondary metabolites are not the key factor in protecting plants from pathogenic microorganisms. On the other hand, adding FZB42 to plants compensate, at least in part, changes in the community structure caused by the pathogen, indicating an interesting mechanism of plant protection by beneficial Bacilli. Sub-lethal concentrations of cyclic lipopeptides and volatiles produced by plant-associated Bacilli trigger pathways of induced systemic resistance (ISR), which protect plants against attacks of pathogenic microbes, viruses, and nematodes. Stimulation of ISR by bacterial metabolites is likely the main mechanism responsible for biocontrol action of FZB42.
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                Author and article information

                Contributors
                Journal
                Front Microbiol
                Front Microbiol
                Front. Microbiol.
                Frontiers in Microbiology
                Frontiers Media S.A.
                1664-302X
                18 November 2015
                2015
                : 6
                : 1286
                Affiliations
                Department of Biosciences, COMSATS Institute of Information Technology Islamabad, Pakistan
                Author notes

                Edited by: Anton Hartmann, Helmholtz Zentrum München, German Research Center for Environmental Health, Germany

                Reviewed by: Biswapriya Biswavas Misra, University of Florida, USA; Oswaldo Valdes-Lopez, National Autonomus University of Mexico, Mexico

                *Correspondence: Fauzia Yusuf Hafeez fauzia@ 123456comsats.edu.pk

                This article was submitted to Plant Biotic Interactions, a section of the journal Frontiers in Microbiology

                Article
                10.3389/fmicb.2015.01286
                4649038
                26635754
                aa543754-5f91-494f-8e3d-2131c1ef1f74
                Copyright © 2015 Shakeel, Rais, Hassan and Hafeez.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 21 August 2015
                : 03 November 2015
                Page count
                Figures: 2, Tables: 4, Equations: 2, References: 76, Pages: 12, Words: 8836
                Funding
                Funded by: Higher Education Commission, Pakistan 10.13039/501100004681
                Award ID: 20-1982
                Categories
                Plant Science
                Original Research

                Microbiology & Virology
                bio fertilizer,pgpr,rhizobacteria,zinc,rice,super basmati,basmati-385,16s rrna gene
                Microbiology & Virology
                bio fertilizer, pgpr, rhizobacteria, zinc, rice, super basmati, basmati-385, 16s rrna gene

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