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      Machine learning reveals orbital interaction in materials

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          Abstract

          We propose a novel representation of materials named an ‘orbital-field matrix (OFM)’, which is based on the distribution of valence shell electrons. We demonstrate that this new representation can be highly useful in mining material data. Experimental investigation shows that the formation energies of crystalline materials, atomization energies of molecular materials, and local magnetic moments of the constituent atoms in bimetal alloys of lanthanide metal and transition-metal can be predicted with high accuracy using the OFM. Knowledge regarding the role of the coordination numbers of the transition-metal and lanthanide elements in determining the local magnetic moments of the transition-metal sites can be acquired directly from decision tree regression analyses using the OFM.

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          Generalized Gradient Approximation Made Simple.

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            Atom-centered symmetry functions for constructing high-dimensional neural network potentials.

            Neural networks offer an unbiased and numerically very accurate approach to represent high-dimensional ab initio potential-energy surfaces. Once constructed, neural network potentials can provide the energies and forces many orders of magnitude faster than electronic structure calculations, and thus enable molecular dynamics simulations of large systems. However, Cartesian coordinates are not a good choice to represent the atomic positions, and a transformation to symmetry functions is required. Using simple benchmark systems, the properties of several types of symmetry functions suitable for the construction of high-dimensional neural network potential-energy surfaces are discussed in detail. The symmetry functions are general and can be applied to all types of systems such as molecules, crystalline and amorphous solids, and liquids.
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              970 million druglike small molecules for virtual screening in the chemical universe database GDB-13.

              GDB-13 enumerates small organic molecules containing up to 13 atoms of C, N, O, S, and Cl following simple chemical stability and synthetic feasibility rules. With 977,468,314 structures, GDB-13 is the largest publicly available small organic molecule database to date.
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                Author and article information

                Journal
                Sci Technol Adv Mater
                Sci Technol Adv Mater
                TSTA
                tsta20
                Science and Technology of Advanced Materials
                Taylor & Francis
                1468-6996
                1878-5514
                2017
                26 October 2017
                : 18
                : 1
                : 756-765
                Affiliations
                [ a ] Japan Advanced Institute of Science and Technology , Nomi, Japan.
                [ b ] Elements Strategy Initiative Center for Magnetic Materials, National Institute for Materials Science , Tsukuba, Japan.
                [ c ] Center for Materials Research by Information Integration, Research and Services Division of Materials Data and Integrated System, National Institute for Materials Science , Tsukuba, Japan.
                [ d ] Research Center for Computational Design of Advanced Functional Materials, National Institute of Advanced Industrial Science and Technology , Tsukuba, Japan.
                [ e ] JST, PRESTO , Kawaguchi, Japan.
                [ f ] Graduate School of Information Science and Technology, Hokkaido University , Sapporo, Japan.
                [ g ] Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, University of Tokyo , Kashiwa, Japan.
                [ h ] RIKEN Center for Advanced Intelligence Project , Tokyo, Japan.
                Author notes
                Article
                1378060
                10.1080/14686996.2017.1378060
                5678453
                29152012
                b2046f82-d193-4a8b-a3fa-be142dc5c9a3
                © 2017 Informa UK Limited, trading as Taylor & Francis Group

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 30 June 2017
                : 07 September 2017
                : 07 September 2017
                Page count
                Figures: 4, Tables: 3, Equations: 125, References: 40, Pages: 10
                Funding
                Funded by: Precursory Research for Embryonic Science and Technology 10.13039/501100009023
                This work was supported in part by Precursory Research for Embryonic Science and Technology from Japan Science and Technology Agency (JST), by the Elements Strategy Initiative Project under the auspice of MEXT, by ‘Materials research by Information Integration’ Initiative (MI2 I) project of the Support Program for Starting Up Innovation Hub from Japan Science and Technology Agency (JST), by MEXT as a social and scientific priority issue (Creation of new functional devices and high-performance materials to support next-generation industries; CDMSI) to be tackled by using post-K computer, and also by JSPS KAKENHI [Grant Numbers 17K19953 and 17H01783]..
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                New topics/Others

                material descriptor,machine learning,data mining,magnetic materials,material informatics

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