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      Population-level assessment of genetic diversity and habitat fragmentation in critically endangered Grauer's gorillas

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          Abstract

          The critically endangered Grauer's gorilla (Gorilla beringei graueri) has experienced an estimated 77% population decline within a single generation. Although crucial for informed conservation decisions, there is no clear understanding about population structure and distribution of genetic diversity across the species' highly fragmented range. We fill this gap by studying several core and peripheral Grauer's gorilla populations throughout their distribution range.

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          Estimating the probability of identity among genotypes in natural populations: cautions and guidelines.

          Individual identification using DNA fingerprinting methods is emerging as a critical tool in conservation genetics and molecular ecology. Statistical methods that estimate the probability of sampling identical genotypes using theoretical equations generally assume random associations between alleles within and among loci. These calculations are probably inaccurate for many animal and plant populations due to population substructure. We evaluated the accuracy of a probability of identity (P(ID)) estimation by comparing the observed and expected P(ID), using large nuclear DNA microsatellite data sets from three endangered species: the grey wolf (Canis lupus), the brown bear (Ursus arctos), and the Australian northern hairy-nosed wombat (Lasiorinyus krefftii). The theoretical estimates of P(ID) were consistently lower than the observed P(ID), and can differ by as much as three orders of magnitude. To help researchers and managers avoid potential problems associated with this bias, we introduce an equation for P(ID) between sibs. This equation provides an estimator that can be used as a conservative upper bound for the probability of observing identical multilocus genotypes between two individuals sampled from a population. We suggest computing the actual observed P(ID) when possible and give general guidelines for the number of codominant and dominant marker loci required to achieve a reasonably low P(ID) (e.g. 0.01-0.0001).
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            Introduction to Conservation Genetics

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              When Are Peripheral Populations Valuable for Conservation?

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                Author and article information

                Journal
                American Journal of Physical Anthropology
                Am J Phys Anthropol
                Wiley
                00029483
                March 2018
                March 2018
                January 04 2018
                : 165
                : 3
                : 565-575
                Affiliations
                [1 ]Department of Ecology and Genetics; Evolutionary Biology Centre, Uppsala University; Uppsala Sweden
                [2 ]Primatology Department; Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6; Leipzig Germany
                [3 ]Dian Fossey Gorilla Fund International, 800 Cherokee Avenue; Atlanta Georgia
                [4 ]Institut Congolais pour la Conservation de la Nature, N4; Réserve de Faune à Okapis Democratic Republic of Congo
                [5 ]Department of Anthropology; University of California, Davis, One Shields Ave; Davis California
                Article
                10.1002/ajpa.23393
                29313894
                b3ae8c8a-7d4c-4755-b796-24ec8c5d589c
                © 2018

                http://doi.wiley.com/10.1002/tdm_license_1.1

                http://onlinelibrary.wiley.com/termsAndConditions#vor

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