190
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: not found

      Ambient DESI and LESA-MS Analysis of Proteins Adsorbed to a Biomaterial Surface Using In-Situ Surface Tryptic Digestion

      research-article

      Read this article at

      ScienceOpenPublisherPMC
      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          The detection and identification of proteins adsorbed onto biomaterial surfaces under ambient conditions has significant experimental advantages but has proven to be difficult to achieve with conventional measuring technologies. In this study, we present an adaptation of desorption electrospray ionization (DESI) and liquid extraction surface analysis (LESA) mass spectrometry (MS) coupled with in-situ surface tryptic digestion to identify protein species from a biomaterial surface. Cytochrome c, myoglobin, and BSA in a combination of single and mixture spots were printed in an array format onto Permanox slides, followed by in-situ surface digestion and detection via MS. Automated tandem MS performed on surface peptides was able to identify the proteins via MASCOT. Limits of detection were determined for DESI-MS and a comparison of DESI and LESA-MS peptide spectra characteristics and sensitivity was made. DESI-MS images of the arrays were produced and analyzed with imaging multivariate analysis to automatically separate peptide peaks for each of the proteins within a mixture into distinct components. This is the first time that DESI and LESA-MS have been used for the in-situ detection of surface digested proteins on biomaterial surfaces and presents a promising proof of concept for the use of ambient MS in the rapid and automated analysis of surface proteins.

          Graphical abstract

          Electronic supplementary material

          The online version of this article (doi:10.1007/s13361-013-0737-3) contains supplementary material, which is available to authorized users.

          Related collections

          Most cited references41

          • Record: found
          • Abstract: found
          • Article: not found

          Combinatorial Development of Biomaterials for Clonal Growth of Human Pluripotent Stem Cells

          Both human embryonic stem (hES) cells and induced pluripotent stem (hiPS) cells can self-renew indefinitely in culture, however current methods to clonally grow them are inefficient and poorly-defined for genetic manipulation and therapeutic purposes. Here we develop the first chemically-defined, xeno-free, feeder-free synthetic substrates to support robust self-renewal of fully-dissociated hES and hiPS cells. Materials properties including wettability, surface topography, surface chemistry and indentation elastic modulus of all polymeric substrates were quantified using high-throughput methods to develop structure/function relationships between materials properties and biological performance. These analyses show that optimal hES cell substrates are generated from monomers with high acrylate content, have a moderate wettability, and employ integrin αvβ3 and αvβ5 engagement with adsorbed vitronectin to promote colony formation. The structure/function methodology employed herein provides a general framework for the combinatorial development of synthetic substrates for stem cell culture.
            Bookmark
            • Record: found
            • Abstract: not found
            • Article: not found

            Biomedical surface science: Foundations to frontiers

              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Proteomic analysis of formalin-fixed paraffin-embedded tissue by MALDI imaging mass spectrometry.

              Archived formalin-fixed paraffin-embedded (FFPE) tissue collections represent a valuable informational resource for proteomic studies. Multiple FFPE core biopsies can be assembled in a single block to form tissue microarrays (TMAs). We describe a protocol for analyzing protein in FFPE-TMAs using matrix-assisted laser desorption/ionization (MALDI) imaging mass spectrometry (IMS). The workflow incorporates an antigen retrieval step following deparaffinization, in situ trypsin digestion, matrix application and then mass spectrometry signal acquisition. The direct analysis of FFPE-TMA tissue using IMS allows direct analysis of multiple tissue samples in a single experiment without extraction and purification of proteins. The advantages of high speed and throughput, easy sample handling and excellent reproducibility make this technology a favorable approach for the proteomic analysis of clinical research cohorts with large sample numbers. For example, TMA analysis of 300 FFPE cores would typically require 6 h of total time through data acquisition, not including data analysis.
                Bookmark

                Author and article information

                Contributors
                david.barrett@nottingham.ac.uk
                Journal
                J Am Soc Mass Spectrom
                J. Am. Soc. Mass Spectrom
                Journal of the American Society for Mass Spectrometry
                Springer US (Boston )
                1044-0305
                1879-1123
                19 September 2013
                19 September 2013
                2013
                : 24
                : 1927-1936
                Affiliations
                [ ]Centre for Analytical Bioscience, School of Pharmacy, University of Nottingham, Nottingham, NG7 2RD UK
                [ ]Laboratory of Biophysics and Surface Analysis, School of Pharmacy, University of Nottingham, Nottingham, NG7 2RD UK
                Article
                737
                10.1007/s13361-013-0737-3
                3837234
                24048891
                b8f23cee-4436-417b-a485-067e9902e5f1
                © The Author(s) 2013

                Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited.

                History
                : 16 July 2013
                : 20 August 2013
                : 20 August 2013
                Categories
                Research Article
                Custom metadata
                © American Society for Mass Spectrometry 2013

                Analytical chemistry
                ms imaging,desi-ms,protein arrays,in-situ digestion,mcr analysis,lesa-ms,ambient ms
                Analytical chemistry
                ms imaging, desi-ms, protein arrays, in-situ digestion, mcr analysis, lesa-ms, ambient ms

                Comments

                Comment on this article