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      Some Reduction Operations to Pairwise Compatibility Graphs

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          Abstract

          A graph \(G=(V,E)\) with a vertex set \(V\) and an edge set \(E\) is called a pairwise compatibility graph (PCG, for short) if there are a tree \(T\) whose leaf set is \(V\), a non-negative edge weight \(w\) in \(T\), and two non-negative reals \(d_{\min}\leq d_{\max}\) such that \(G\) has an edge \(uv\in E\) if and only if the distance between \(u\) and \(v\) in the weighted tree \((T,w)\) is in the interval \([d_{\min}, d_{\max}]\). PCG is a new graph class motivated from bioinformatics. In this paper, we give some necessary and sufficient conditions for PCG based on cut-vertices and twins, which provide reductions among PCGs. Our results imply that complete \(k\)-partite graph, cactus, and some other graph classes are subsets of PCG.

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          Pairwise Compatibility Graphs: A Survey

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            Efficient Generation of Uniform Samples from Phylogenetic Trees

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              Pairwise compatibility graphs revisited

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                Author and article information

                Journal
                09 April 2018
                Article
                1804.02887
                b9aeffb8-9d55-455d-9311-78335999b530

                http://arxiv.org/licenses/nonexclusive-distrib/1.0/

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                Custom metadata
                9 pages and 3 figures
                cs.DS

                Data structures & Algorithms
                Data structures & Algorithms

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