25
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Invertebrate Iridoviruses: A Glance over the Last Decade

      review-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Members of the family Iridoviridae (iridovirids) are large dsDNA viruses that infect both invertebrate and vertebrate ectotherms and whose symptoms range in severity from minor reductions in host fitness to systemic disease and large-scale mortality. Several characteristics have been useful for classifying iridoviruses; however, novel strains are continuously being discovered and, in many cases, reliable classification has been challenging. Further impeding classification, invertebrate iridoviruses (IIVs) can occasionally infect vertebrates; thus, host range is often not a useful criterion for classification. In this review, we discuss the current classification of iridovirids, focusing on genomic and structural features that distinguish vertebrate and invertebrate iridovirids and viral factors linked to host interactions in IIV6 (Invertebrate iridescent virus 6). In addition, we show for the first time how complete genome sequences of viral isolates can be leveraged to improve classification of new iridovirid isolates and resolve ambiguous relations. Improved classification of the iridoviruses may facilitate the identification of genus-specific virulence factors linked with diverse host phenotypes and host interactions.

          Related collections

          Most cited references158

          • Record: found
          • Abstract: found
          • Article: not found

          The Jak-STAT signaling pathway is required but not sufficient for the antiviral response of drosophila.

          The response of drosophila to bacterial and fungal infections involves two signaling pathways, Toll and Imd, which both activate members of the transcription factor NF-kappaB family. Here we have studied the global transcriptional response of flies to infection with drosophila C virus. Viral infection induced a set of genes distinct from those regulated by the Toll or Imd pathways and triggered a signal transducer and activator of transcription (STAT) DNA-binding activity. Genetic experiments showed that the Jak kinase Hopscotch was involved in the control of the viral load in infected flies and was required but not sufficient for the induction of some virus-regulated genes. Our results indicate that in addition to Toll and Imd, a third, evolutionary conserved innate immunity pathway functions in drosophila and counters viral infection.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms.

            Giant viruses such as Mimivirus isolated from amoeba found in aquatic habitats show biological sophistication comparable to that of simple cellular life forms and seem to evolve by similar mechanisms, including extensive gene duplication and horizontal gene transfer (HGT), possibly in part through a viral parasite, the virophage. We report here the isolation of "Marseille" virus, a previously uncharacterized giant virus of amoeba. The virions of Marseillevirus encompass a 368-kb genome, a minimum of 49 proteins, and some messenger RNAs. Phylogenetic analysis of core genes indicates that Marseillevirus is the prototype of a family of nucleocytoplasmic large DNA viruses (NCLDV) of eukaryotes. The genome repertoire of the virus is composed of typical NCLDV core genes and genes apparently obtained from eukaryotic hosts and their parasites or symbionts, both bacterial and viral. We propose that amoebae are "melting pots" of microbial evolution where diverse forms emerge, including giant viruses with complex gene repertoires of various origins.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Host defense, viruses and apoptosis.

              To thwart viral infection, the host has developed a formidable and integrated defense network that comprises our innate and adaptive immune response. In recent years, it has become clear that in an attempt to prevent viral replication, viral dissemination or persistent viral infection of the cell, many of these protective measures actually involve the induction of programmed cell death, or apoptosis. An initial response to viral infection primarily involves the innate arm of immunity and the killing of infected cells with cytotoxic lymphocytes such as natural killer (NK) cells through mechanisms that include the employment of perforin and granzymes. Once the virus has invaded the cell, however, a second host defense-mediated response is also triggered which involves the induction of a family of cytokines known as the interferons (IFNs). The IFNs, which are essential for initiating and coordinating a successful antiviral response, function by stimulating the adaptive arm of immunity involving cytotoxic T cells (CTLs), and by inducing a number of intracellular genes that directly prevent virus replication/cytolysis or that facilitate apoptosis. The IFN-induced gene family is now known to comprise the death ligand TRAIL, the dsRNA-dependent protein kinase (PKR), interferon regulatory factors (IRFs) and the promyelocytic leukemia gene (PML), all of which have been reported to be mediators of cell death. That DNA array analyses indicate that numerous cellular genes, many as yet uncharacterized, may similarly be induced by IFN, further emphasizes the likely importance that these cytokines have in the modulation of apoptosis. This likelihood is additionally underlined by the elaborate strategies developed by viruses to inhibit IFN-antiviral function and the mechanisms of cell death.
                Bookmark

                Author and article information

                Journal
                Viruses
                Viruses
                viruses
                Viruses
                MDPI
                1999-4915
                30 March 2018
                April 2018
                : 10
                : 4
                : 161
                Affiliations
                [1 ]Department of Medical Microbiology, School of Medicine, Acıbadem Mehmet Ali Aydınlar University, Atasehir, Istanbul 34752, Turkey; orhn.ozcn@ 123456hotmail.com (O.Ö.); aycazeynep@ 123456gmail.com (A.Z.I.-A.); aozgen@ 123456gelisim.edu.tr (A.Ö.)
                [2 ]Department of Biostatistics and Medical Informatics, Acıbadem Mehmet Ali Aydınlar University, Atasehir, Istanbul 34752, Turkey
                [3 ]Evolutionary Genetics, Groningen Institute for Evolutionary Life Sciences, University of Groningen, P.O. Box 11103, 9700 CC Groningen, The Netherlands
                [4 ]Stored Product Insect and Engineering Research Unit, USDA-Agricultural Research Service, Center for Grain and Animal Health Research, Manhattan, KS 66502, USA; erin.scully@ 123456ARS.USDA.GOV
                [5 ]Vocational School of Health, Istanbul Gelisim University, Avcılar, Istanbul 34310, Turkey
                Author notes
                [* ]Correspondence: ikbal.agah.ince@ 123456gmail.com ; Tel.: +90-505-526-84-94 or +90-216-500-41-24
                Author information
                https://orcid.org/0000-0003-2299-9946
                Article
                viruses-10-00161
                10.3390/v10040161
                5923455
                29601483
                c4fff111-da6d-4c76-8c38-515161d133c5
                © 2018 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 07 November 2017
                : 23 February 2018
                Categories
                Review

                Microbiology & Virology
                invertebrate iridoviruses,genomics,proteomics,classification
                Microbiology & Virology
                invertebrate iridoviruses, genomics, proteomics, classification

                Comments

                Comment on this article