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      Polyketide reductases in defense‐related parasorboside biosynthesis in Gerbera hybrida share processing strategies with microbial polyketide synthase systems

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          Summary

          • Plant polyketides are well‐known for their crucial functions in plants and their importance in the context of human health. They are synthesized by type III polyketide synthases (PKSs) and their final functional diversity is determined by post‐PKS tailoring enzymes. Gerbera hybrida is rich in two defense‐related polyketides: gerberin and parasorboside. Their synthesis is known to be initiated by GERBERA 2‐PYRONE SYNTHASE 1 (G2PS1), but the polyketide reductases (PKRs) that determine their final structure have not yet been identified.

          • We identified two PKR candidates in the pathway, GERBERA REDUCTASE 1 (GRED1) and GRED2. Gene expression and metabolite analysis of different gerbera tissues, cultivars, and transgenic gerbera plants, and in vitro enzyme assays, were performed for functional characterization of the enzymes.

          • GRED1 and GRED2 catalyze the second reduction step in parasorboside biosynthesis. They reduce the proximal keto domain of the linear CoA bound intermediate before lactonization.

          • We identified a crucial tailoring step in an important gerbera PKS pathway and show that plant polyketide biosynthesis shares processing strategies with fungi and bacteria. The two tailoring enzymes are recruited from the ancient sporopollenin biosynthetic pathway to a defense‐related PKS pathway in gerbera. Our data provide an example of how plants recruit conserved genes to new functions in secondary metabolism that are important for environmental adaptation.

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          Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

          The two most commonly used methods to analyze data from real-time, quantitative PCR experiments are absolute quantification and relative quantification. Absolute quantification determines the input copy number, usually by relating the PCR signal to a standard curve. Relative quantification relates the PCR signal of the target transcript in a treatment group to that of another sample such as an untreated control. The 2(-Delta Delta C(T)) method is a convenient way to analyze the relative changes in gene expression from real-time quantitative PCR experiments. The purpose of this report is to present the derivation, assumptions, and applications of the 2(-Delta Delta C(T)) method. In addition, we present the derivation and applications of two variations of the 2(-Delta Delta C(T)) method that may be useful in the analysis of real-time, quantitative PCR data. Copyright 2001 Elsevier Science (USA).
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            GATEWAY vectors for Agrobacterium-mediated plant transformation.

            Agrobacterium tumefaciens is the preferred method for transformation of a wide range of plant species. Commonly, the genes to be transferred are cloned between the left and right T-DNA borders of so-called binary T-DNA vectors that can replicate both in E. coli and Agrobacterium. Because these vectors are generally large, cloning can be time-consuming and laborious. Recently, the GATEWAY conversion technology has provided a fast and reliable alternative to the cloning of sequences into large acceptor plasmids.
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              Assembly-line enzymology for polyketide and nonribosomal Peptide antibiotics: logic, machinery, and mechanisms.

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                Author and article information

                Contributors
                teemu.teeri@helsinki.fi
                Journal
                New Phytol
                New Phytol
                10.1111/(ISSN)1469-8137
                NPH
                The New Phytologist
                John Wiley and Sons Inc. (Hoboken )
                0028-646X
                1469-8137
                22 July 2022
                October 2022
                : 236
                : 1 ( doiID: 10.1111/nph.v236.1 )
                : 296-308
                Affiliations
                [ 1 ] Department of Agricultural Sciences, Viikki Plant Science Centre University of Helsinki Helsinki 00014 UH Finland
                Author notes
                [*] [* ] Author for correspondence:

                Teemu H. Teeri

                Email: teemu.teeri@ 123456helsinki.fi

                Author information
                https://orcid.org/0000-0001-6959-7755
                https://orcid.org/0000-0002-4875-0682
                https://orcid.org/0000-0001-6512-0810
                https://orcid.org/0000-0002-3812-7213
                Article
                NPH18328 2022-39190
                10.1111/nph.18328
                9541798
                35719102
                d11b2e05-7f6b-48cf-93fd-acc193f76614
                © 2022 The Authors. New Phytologist © 2022 New Phytologist Foundation.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.

                History
                : 03 February 2022
                : 13 June 2022
                Page count
                Figures: 6, Tables: 1, Pages: 308, Words: 10235
                Funding
                Funded by: Academy of Finland , doi 10.13039/501100002341;
                Award ID: 139513
                Funded by: The China Scholarship Council
                Categories
                Full Paper
                Research
                Full Papers
                Custom metadata
                2.0
                October 2022
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.2.0 mode:remove_FC converted:07.10.2022

                Plant science & Botany
                gerbera,gerberin,parasorboside,polyketide biosynthesis,polyketide reductase,recruitment,sporopollenin

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