6
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Anthranilic acid, the new player in the ensemble of aromatic residue labeling precursor compounds

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          The application of metabolic precursors for selective stable isotope labeling of aromatic residues in cell-based protein overexpression has already resulted in numerous NMR probes to study the structural and dynamic characteristics of proteins. With anthranilic acid, we present the structurally simplest precursor for exclusive tryptophan side chain labeling. A synthetic route to 13C, 2H isotopologues allows the installation of isolated 13C– 1H spin systems in the indole ring of tryptophan, representing a versatile tool to investigate side chain motion using relaxation-based experiments without the loss of magnetization due to strong 1J CC and weaker 2J CH scalar couplings, as well as dipolar interactions with remote hydrogens. In this article, we want to introduce this novel precursor in the context of hitherto existing techniques of in vivo aromatic residue labeling.

          Electronic supplementary material

          The online version of this article (doi:10.1007/s10858-017-0129-2) contains supplementary material, which is available to authorized users.

          Related collections

          Most cited references46

          • Record: found
          • Abstract: found
          • Article: not found

          A method for efficient isotopic labeling of recombinant proteins.

          A rapid and efficient approach for preparing isotopically labeled recombinant proteins is presented. The method is demonstrated for 13C labeling of the C-terminal domain of angiopoietin-2, 15N labeling of ubiquitin and for 2H/13C/15N labeling of the Escherichia coli outer-membrane lipoprotein Lpp-56. The production method generates cell mass using unlabeled rich media followed by exchange into a small volume of labeled media at high cell density. Following a short period for growth recovery and unlabeled metabolite clearance, the cells are induced. The expression yields obtained provide a fourfold to eightfold reduction in isotope costs using simple shake flask growths.
            Bookmark
            • Record: found
            • Abstract: not found
            • Article: not found

            An NMR perspective on enzyme dynamics.

              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Cation-pi interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp.

              Cations bind to the pi face of an aromatic structure through a surprisingly strong, non-covalent force termed the cation-pi interaction. The magnitude and generality of the effect have been established by gas-phase measurements and by studies of model receptors in aqueous media. To first order, the interaction can be considered an electrostatic attraction between a positive charge and the quadrupole moment of the aromatic. A great deal of direct and circumstantial evidence indicates that cation-pi interactions are important in a variety of proteins that bind cationic ligands or substrates. In this context, the amino acids phenylalanine (Phe), tyrosine (Tyr), and tryptophan (Trp) can be viewed as polar, yet hydrophobic, residues.
                Bookmark

                Author and article information

                Contributors
                +43 4277 52129 , roman.lichtenecker@univie.ac.at
                Journal
                J Biomol NMR
                J. Biomol. NMR
                Journal of Biomolecular Nmr
                Springer Netherlands (Dordrecht )
                0925-2738
                1573-5001
                31 August 2017
                31 August 2017
                2017
                : 69
                : 1
                : 13-22
                Affiliations
                [1 ]ISNI 0000 0001 2286 1424, GRID grid.10420.37, Institute of Organic Chemistry, , University of Vienna, ; Währingerstr. 38, 1090 Vienna, Austria
                [2 ]ISNI 0000 0001 2286 1424, GRID grid.10420.37, Christian Doppler Laboratory for High-Content Structural Biology and Biotechnology, Department of Structural and Computational Biology, Max F. Perutz Laboratories, , University of Vienna, ; Dr-Bohr-Gasse 9, 1030 Vienna, Austria
                Article
                129
                10.1007/s10858-017-0129-2
                5626795
                28861670
                e37b2fe5-e659-4652-882b-b41938c1055e
                © The Author(s) 2017

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

                History
                : 14 June 2017
                : 28 August 2017
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100003065, Universität Wien;
                Award ID: uni:docs
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100006012, Christian Doppler Forschungsgesellschaft;
                Categories
                Article
                Custom metadata
                © Springer Science+Business Media B.V. 2017

                Molecular biology
                isotope labeling,protein nmr,tryptophan,anthranilic acid
                Molecular biology
                isotope labeling, protein nmr, tryptophan, anthranilic acid

                Comments

                Comment on this article