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      Heme cross-feeding can augment Staphylococcus aureus and Enterococcus faecalis dual species biofilms

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          Abstract

          The contribution of biofilms to virulence and as a barrier to treatment is well-established for Staphylococcus aureus and Enterococcus faecalis, both nosocomial pathogens frequently isolated from biofilm-associated infections. Despite frequent co-isolation, their interactions in biofilms have not been well-characterized. We report that in combination, these two species can give rise to augmented biofilms biomass that is dependent on the activation of E. faecalis aerobic respiration. In E. faecalis, respiration requires both exogenous heme to activate the cydAB-encoded heme-dependent cytochrome bd, and the availability of O 2. We determined that the ABC transporter encoded by cydDC contributes to heme import. In dual species biofilms, S. aureus provides the heme to activate E. faecalis respiration. S. aureus mutants deficient in heme biosynthesis were unable to augment biofilms whereas heme alone is sufficient to augment E. faecalis mono-species biofilms. Our results demonstrate that S. aureus-derived heme, likely in the form of released hemoproteins, promotes E. faecalis biofilm formation, and that E. faecalis gelatinase activity facilitates heme extraction from hemoproteins. This interspecies interaction and metabolic cross-feeding may explain the frequent co-occurrence of these microbes in biofilm-associated infections.

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          A Genetic Resource for Rapid and Comprehensive Phenotype Screening of Nonessential Staphylococcus aureus Genes

          ABSTRACT To enhance the research capabilities of investigators interested in Staphylococcus aureus, the Nebraska Center for Staphylococcal Research (CSR) has generated a sequence-defined transposon mutant library consisting of 1,952 strains, each containing a single mutation within a nonessential gene of the epidemic community-associated methicillin-resistant S. aureus (CA-MRSA) isolate USA300. To demonstrate the utility of this library for large-scale screening of phenotypic alterations, we spotted the library on indicator plates to assess hemolytic potential, protease production, pigmentation, and mannitol utilization. As expected, we identified many genes known to function in these processes, thus validating the utility of this approach. Importantly, we also identified genes not previously associated with these phenotypes. In total, 71 mutants displayed differential hemolysis activities, the majority of which were not previously known to influence hemolysin production. Furthermore, 62 mutants were defective in protease activity, with only 14 previously demonstrated to be involved in the production of extracellular proteases. In addition, 38 mutations affected pigment formation, while only 7 influenced mannitol fermentation, underscoring the sensitivity of this approach to identify rare phenotypes. Finally, 579 open reading frames were not interrupted by a transposon, thus providing potentially new essential gene targets for subsequent antibacterial discovery. Overall, the Nebraska Transposon Mutant Library represents a valuable new resource for the research community that should greatly enhance investigations of this important human pathogen.
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            Antibiotics versus biofilm: an emerging battleground in microbial communities

            Biofilm is a complex structure of microbiome having different bacterial colonies or single type of cells in a group; adhere to the surface. These cells are embedded in extracellular polymeric substances, a matrix which is generally composed of eDNA, proteins and polysaccharides, showed high resistance to antibiotics. It is one of the major causes of infection persistence especially in nosocomial settings through indwelling devices. Quorum sensing plays an important role in regulating the biofilm formation. There are many approaches being used to control infections by suppressing its formation but CRISPR-CAS (gene editing technique) and photo dynamic therapy (PDT) are proposed to be used as therapeutic approaches to subside bacterial biofim infections, especially caused by deadly drug resistant bad bugs.
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              Wound microbiology and associated approaches to wound management.

              The majority of dermal wounds are colonized with aerobic and anaerobic microorganisms that originate predominantly from mucosal surfaces such as those of the oral cavity and gut. The role and significance of microorganisms in wound healing has been debated for many years. While some experts consider the microbial density to be critical in predicting wound healing and infection, others consider the types of microorganisms to be of greater importance. However, these and other factors such as microbial synergy, the host immune response, and the quality of tissue must be considered collectively in assessing the probability of infection. Debate also exists regarding the value of wound sampling, the types of wounds that should be sampled, and the sampling technique required to generate the most meaningful data. In the laboratory, consideration must be given to the relevance of culturing polymicrobial specimens, the value in identifying one or more microorganisms, and the microorganisms that should be assayed for antibiotic susceptibility. Although appropriate systemic antibiotics are essential for the treatment of deteriorating, clinically infected wounds, debate exists regarding the relevance and use of antibiotics (systemic or topical) and antiseptics (topical) in the treatment of nonhealing wounds that have no clinical signs of infection. In providing a detailed analysis of wound microbiology, together with current opinion and controversies regarding wound assessment and treatment, this review has attempted to capture and address microbiological aspects that are critical to the successful management of microorganisms in wounds.
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                Author and article information

                Contributors
                micchn@nus.edu.sg
                kkline@ntu.edu.sg
                Journal
                ISME J
                ISME J
                The ISME Journal
                Nature Publishing Group UK (London )
                1751-7362
                1751-7370
                19 May 2022
                19 May 2022
                August 2022
                : 16
                : 8
                : 2015-2026
                Affiliations
                [1 ]GRID grid.4280.e, ISNI 0000 0001 2180 6431, Department of Microbiology and Immunology, , National University of Singapore, ; Singapore, Singapore
                [2 ]GRID grid.4280.e, ISNI 0000 0001 2180 6431, Department of Surgery Yong Loo Lin School of Medicine, , National University of Singapore, ; Singapore, Singapore
                [3 ]GRID grid.410759.e, ISNI 0000 0004 0451 6143, Infectious Disease Translational Research Program, , National University Health System, ; Singapore, Singapore
                [4 ]GRID grid.4280.e, ISNI 0000 0001 2180 6431, Singapore Centre for Environmental Life Sciences Engineering, , National University of Singapore, ; Singapore, Singapore
                [5 ]GRID grid.59025.3b, ISNI 0000 0001 2224 0361, Singapore Centre for Environmental Life Sciences Engineering, , Nanyang Technological University, ; Singapore, Singapore
                [6 ]GRID grid.59025.3b, ISNI 0000 0001 2224 0361, Nanyang Technological University Institute for Health Technologies, Interdisciplinary Graduate School, , Nanyang Technological University, ; Singapore, Singapore
                [7 ]GRID grid.59025.3b, ISNI 0000 0001 2224 0361, Singapore Centre for Environmental Life Sciences Engineering, Interdisciplinary Graduate Program, , Nanyang Technological University, ; Singapore, Singapore
                [8 ]GRID grid.240988.f, ISNI 0000 0001 0298 8161, Department of Laboratory Medicine, , Tan Tock Seng Hospital, ; Singapore, Singapore
                [9 ]GRID grid.59025.3b, ISNI 0000 0001 2224 0361, Singapore Phenome Center, Lee Kong Chian School of Medicine, , Nanyang Technological University, ; Nanyang, Singapore
                [10 ]GRID grid.59025.3b, ISNI 0000 0001 2224 0361, School of Biological Sciences, , Nanyang Technological University, ; Singapore, Singapore
                Author information
                http://orcid.org/0000-0002-1143-5611
                http://orcid.org/0000-0002-9455-1051
                http://orcid.org/0000-0002-4637-488X
                http://orcid.org/0000-0003-3702-9491
                http://orcid.org/0000-0001-9662-4958
                http://orcid.org/0000-0003-0975-2244
                http://orcid.org/0000-0002-2831-8737
                http://orcid.org/0000-0002-5472-3074
                Article
                1248
                10.1038/s41396-022-01248-1
                9296619
                35589966
                e3c36ef3-3a8c-465e-8f96-7fd95b18eeb4
                © The Author(s) 2022

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 12 August 2021
                : 18 April 2022
                : 29 April 2022
                Funding
                Funded by: FundRef https://doi.org/10.13039/501100001381, National Research Foundation Singapore (National Research Foundation-Prime Minister's office, Republic of Singapore);
                Award ID: SCELSE
                Award Recipient :
                Funded by: FundRef https://doi.org/10.13039/501100001459, Ministry of Education - Singapore (MOE);
                Award ID: SCELSE
                Award Recipient :
                Funded by: FundRef https://doi.org/10.13039/100007419, Lee Foundation;
                Categories
                Article
                Custom metadata
                © International Society for Microbial Ecology 2022

                Microbiology & Virology
                biofilms,clinical microbiology,bacteriology,microbial ecology
                Microbiology & Virology
                biofilms, clinical microbiology, bacteriology, microbial ecology

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