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      Immunological strategy for detecting the pro-inflammatory cytokine TNF-alpha in salmonids

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          Abstract

          Background: Tumour necrosis factor-alpha (TNF-α) is a pro-inflammatory cytokine which exerts a variety of immunological functions in vertebrates. TNF-α has been identified and cloned in a number of teleost fish species; nevertheless, the functions displayed by this cytokine in fishes remain poorly understood, given that the low sequence identity compared to their mammalian counterpart, limit fish TNF-α detection using mammalian antibodies. Then, for fish immune response characterization is fundamental the production of specific fish anti-TNF-α antibody. Results: We have developed a monoespecific antibody against the pro-inflammatory molecule TNF-α of salmonid fish. TNF-α epitope region was identified and characterized using bioinformatic tools. The epitope sequence was chemically synthesized using Fmoc strategy, analyzed by RP-HPLC and its molecular weight confirmed by mass spectrometry. The synthetic peptide was used to immunize mice and antibodies from ascitic fluid were purified. The resulting antibody was used for molecular and histochemical detection in gut samples from salmonid fishes treated with different food. By ELISA, we detected a differential expression of TNF-α, the western blot analysis shows recognition of the whole TNF molecule and by immunohistochemistry TNF-α positive cells were observed. Conclusions: We provide an immunological tool, validated through classical immunological assays, which can be a useful tool for characterizing fish TNF-α function.

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          Most cited references27

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          General method for the rapid solid-phase synthesis of large numbers of peptides: specificity of antigen-antibody interaction at the level of individual amino acids.

          R Houghten (1985)
          A novel yet simple method is described that facilitates the synthesis of large numbers of peptides to the extent that the synthesis process need no longer be the limiting factor in many studies involving peptides. By using the methods described, 10-20 mg of 248 different 13-residue peptides representing single amino acid variants of a segment of the hemagglutinin protein (HA1) have been prepared and characterized in less than 4 weeks. Through examination of the binding of these analogs to monoclonal antibodies raised against residues 75-110 of HA1, it was found that a single amino acid, aspartic acid at position 101, is of unique importance to the interaction. Two other residues, aspartic acid-104 and alanine-106, were found to play a lesser but significant role in the binding interaction. Other single positional residue variations appear to be of little or no importance.
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            The innate immune response of finfish--a review of current knowledge.

            The decline in the fisheries of traditional marine species has been an incentive for the diversification of today's aquaculture sector into the intensive rearing of many finfish species. The increasing interest in commercial farming of different finfish species is expected to result in similar environmental and husbandry-related problems as have been experienced in the development of the salmonid farming industry. An understanding of the biology of the fish species being cultured, in particular the immune response is important for improved husbandry and health management of the species. The innate immune system of fish has generated increasing interest in recent years and is now thought to be of key importance in primary defence and in driving adaptive immunity. This review focuses on key components (cellular and humoral) of the innate immune responses of different fish species of commercial importance.
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              SEPPA: a computational server for spatial epitope prediction of protein antigens

              In recent years, a lot of efforts have been made in conformational epitope prediction as antigen proteins usually bind antibodies with an assembly of sequentially discontinuous and structurally compact surface residues. Currently, only a few methods for spatial epitope prediction are available with focus on single residue propensity scales or continual segments clustering. In the method of SEPPA, a concept of ‘unit patch of residue triangle’ was introduced to better describe the local spatial context in protein surface. Besides that, SEPPA incorporated clustering coefficient to describe the spatial compactness of surface residues. Validated by independent testing datasets, SEPPA gave an average AUC value over 0.742 and produced a successful pick-up rate of 96.64%. Comparing with peers, SEPPA shows significant improvement over other popular methods like CEP, DiscoTope and BEpro. In addition, the threshold scores for certain accuracy, sensitivity and specificity are provided online to give the confidence level of the spatial epitope identification. The web server can be accessed at http://lifecenter.sgst.cn/seppa/index.php. Batch query is supported.
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                Author and article information

                Journal
                ejb
                Electronic Journal of Biotechnology
                Electron. J. Biotechnol.
                Pontificia Universidad Católica de Valparaíso (Valparaíso, , Chile )
                0717-3458
                September 2012
                : 15
                : 5
                : 21
                Affiliations
                [03] Valparaíso orgnamePontificia Universidad Católica de Valparaíso orgdiv1Facultad de Recursos Naturales orgdiv2Escuela de Ciencias del Mar Chile
                [02] Valparaíso orgnamePontificia Universidad Católica de Valparaíso orgdiv1Núcleo de Biotecnología de Curauma Chile
                [01] Valparaíso orgnamePontificia Universidad Católica de Valparaíso orgdiv1Instituto de Biología orgdiv2Laboratorio de Genética e Inmunología Molecular Chile
                Article
                S0717-34582012000500021 S0717-3458(12)01500521
                10.2225/vol15-issue5-fulltext-19
                e60fa6e2-c31d-4ebf-8428-10ac1efb6be5

                This work is licensed under a Creative Commons Attribution 4.0 International License.

                History
                : 13 August 2012
                Page count
                Figures: 0, Tables: 0, Equations: 0, References: 25, Pages: 1
                Product

                SciELO Chile

                Categories
                SPECIAL ISSUE ON MARINE BIOTECHOLOGY

                TNF-alpha antibody,fish immunity,salmonid immunity
                TNF-alpha antibody, fish immunity, salmonid immunity

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