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      Nf1 loss promotes Kras‐driven lung adenocarcinoma and results in Psat1‐mediated glutamate dependence

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          Abstract

          Mutations to KRAS are recurrent in lung adenocarcinomas ( LUAD) and are daunting to treat due to the difficulties in KRAS oncoprotein inhibition. A possible resolution to this problem may lie with co‐mutations to other genes that also occur in KRAS ‐driven LUAD that may provide alternative therapeutic vulnerabilities. Approximately 3% of KRAS ‐mutant LUADs carry functional mutations in NF1 gene encoding neurofibromin‐1, a negative regulator of focal adhesion kinase 1 ( FAK1). We evaluated the impact of Nf1 loss on LUAD development using a CRISPR/Cas9 platform in a murine model of Kras‐mutant LUAD. We discovered that Nf1 deactivation is associated with Fak1 hyperactivation and phosphoserine aminotransferase 1 (Psat1) upregulation in mice. Nf1 loss also accelerates murine Kras‐driven LUAD tumorigenesis. Analysis of the transcriptome and metabolome reveals that LUAD cells with mutation to Nf1 are addicted to glutamine metabolism. We also reveal that this metabolic vulnerability can be leveraged as a treatment option by pharmacologically inhibiting glutaminase and/or Psat1. Lastly, the findings advocate that tumor stratification by co‐mutations to KRAS/ NF1 highlights the LAUD patient population expected to be susceptible to inhibiting PSAT1.

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          Keap1 loss promotes Kras-driven lung cancer and results in a dependence on glutaminolysis

          Treating KRAS-mutant lung adenocarcinoma (LUAD) remains a major challenge in cancer treatment given the difficulties associated with directly inhibiting the KRAS oncoprotein 1 . One approach to addressing this challenge is to define frequently co-occurring mutations with KRAS, which themselves may lead to therapeutic vulnerabilities in tumors. Approximately 20% of KRAS-mutant LUAD tumors carry loss-of-function (LOF) mutations in Kelch-like ECH-associated protein 1 (KEAP1) 2-4 , a negative regulator of nuclear factor erythroid 2-like 2 (NFE2L2; hereafter NRF2), which is the master transcriptional regulator of the endogenous antioxidant response 5-10 . The high frequency of mutations in KEAP1 suggests an important role for the oxidative stress response in lung tumorigenesis. Using a CRISPR/Cas9-based approach in a mouse model of Kras-driven LUAD we examined the effects of Keap1 loss in lung cancer progression. We show that loss of Keap1 hyper-activates Nrf2 and promotes Kras-driven LUAD. Combining CRISPR/Cas9-based genetic screening and metabolomic analyses, we show that Keap1/Nrf2-mutant cancers are dependent on increased glutaminolysis, and this property can be therapeutically exploited through the pharmacological inhibition of glutaminase. Finally, we provide a rationale for sub-stratification of human lung cancer patients with KRAS-KEAP1 or -NRF2-mutant tumors as likely to respond to glutaminase inhibition.
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            A primary xenograft model of small-cell lung cancer reveals irreversible changes in gene expression imposed by culture in vitro.

            Traditional approaches to the preclinical investigation of cancer therapies rely on the use of established cell lines maintained in serum-based growth media. This is particularly true of small-cell lung cancer (SCLC), where surgically resected tissue is rarely available. Recent attention has focused on the need for better models that preserve the integrity of cancer stem cell populations, as well as three-dimensional tumor-stromal interactions. Here we describe a primary xenograft model of SCLC in which endobronchial tumor specimens obtained from chemo-naive patients are serially propagated in vivo in immunodeficient mice. In parallel, cell lines grown in conventional tissue culture conditions were derived from each xenograft line, passaged for 6 months, and then reimplanted to generate secondary xenografts. Using the Affymetrix platform, we analyzed gene expression in primary xenograft, xenograft-derived cell line, and secondary xenograft, and compared these data to similar analyses of unrelated primary SCLC samples and laboratory models. When compared with normal lung, primary tumors, xenografts, and cell lines displayed a gene expression signature specific for SCLC. Comparison of gene expression within the xenograft model identified a group of tumor-specific genes expressed in primary SCLC and xenografts that was lost during the transition to tissue culture and that was not regained when the tumors were reestablished as secondary xenografts. Such changes in gene expression may be a common feature of many cancer cell culture systems, with functional implications for the use of such models for preclinical drug development.
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              SLC1A5 mediates glutamine transport required for lung cancer cell growth and survival.

              We have previously identified solute-linked carrier family A1 member 5 (SLC1A5) as an overexpressed protein in a shotgun proteomic analysis of stage I non-small cell lung cancer (NSCLC) when compared with matched controls. We hypothesized that overexpression of SLC1A5 occurs to meet the metabolic demand for lung cancer cell growth and survival. To test our hypothesis, we first analyzed the protein expression of SLC1A5 in archival lung cancer tissues by immunohistochemistry and immunoblotting (N = 98) and in cell lines (N = 36). To examine SLC1A5 involvement in amino acid transportation, we conducted kinetic analysis of l-glutamine (Gln) uptake in lung cancer cell lines in the presence and absence of a pharmacologic inhibitor of SLC1A5, gamma-l-Glutamyl-p-Nitroanilide (GPNA). Finally, we examined the effect of Gln deprivation and uptake inhibition on cell growth, cell-cycle progression, and growth signaling pathways of five lung cancer cell lines. Our results show that (i) SLC1A5 protein is expressed in 95% of squamous cell carcinomas (SCC), 74% of adenocarcinomas (ADC), and 50% of neuroendocrine tumors; (ii) SLC1A5 is located at the cytoplasmic membrane and is significantly associated with SCC histology and male gender; (iii) 68% of Gln is transported in a Na(+)-dependent manner, 50% of which is attributed to SLC1A5 activity; and (iv) pharmacologic and genetic targeting of SLC1A5 decreased cell growth and viability in lung cancer cells, an effect mediated in part by mTOR signaling. These results suggest that SLC1A5 plays a key role in Gln transport controlling lung cancer cells' metabolism, growth, and survival.
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                Author and article information

                Contributors
                wangxiaojing8888@163.com
                bbmccyq@126.com
                Journal
                EMBO Mol Med
                EMBO Mol Med
                10.1002/(ISSN)1757-4684
                EMMM
                embomm
                EMBO Molecular Medicine
                John Wiley and Sons Inc. (Hoboken )
                1757-4676
                1757-4684
                29 April 2019
                June 2019
                : 11
                : 6 ( doiID: 10.1002/emmm.v11.6 )
                : e9856
                Affiliations
                [ 1 ] Anhui Clinical and Preclinical Key Laboratory of Respiratory Disease Department of Respiration First Affiliated Hospital Bengbu Medical College Bengbu Anhui Province China
                [ 2 ] Department of Gynecological Oncology First Affiliated Hospital Bengbu Medical College Bengbu Anhui Province China
                [ 3 ] Department of Immunology Bengbu Medical College Bengbu Anhui Province China
                [ 4 ] Department of Endocrinology and Metabolism Shanghai Jiaotong University Affiliated First People's Hospital Shanghai China
                Author notes
                [*] [* ] Corresponding author. Tel: +86 15105528215; Fax: +86 05523070260; E‐mail: wangxiaojing8888@ 123456163.com

                Corresponding author. Tel: +86 13695528585; Fax: +86 05523070260; E‐mail: bbmccyq@ 123456126.com

                [†]

                These authors contributed equally to this work

                Author information
                https://orcid.org/0000-0001-6848-8688
                https://orcid.org/0000-0002-9783-1112
                Article
                EMMM201809856
                10.15252/emmm.201809856
                6554671
                31036704
                e75c75ae-9e45-4887-85c5-d588bc274f3d
                © 2019 The Authors. Published under the terms of the CC BY 4.0 license

                This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                History
                : 24 September 2018
                : 25 March 2019
                : 02 April 2019
                Page count
                Figures: 6, Tables: 0, Pages: 16, Words: 10157
                Funding
                Funded by: NSFC | National Natural Science Foundation of China
                Award ID: 81772493
                Funded by: Key Program of Natural Science Research of Higher Education of Anhui Province
                Award ID: KJ2017A241
                Funded by: Science and Technology Program of Anhui Province
                Award ID: 2017070503B037
                Award ID: YDZX20183400002554
                Categories
                Research Article
                Research Articles
                Custom metadata
                2.0
                emmm201809856
                June 2019
                Converter:WILEY_ML3GV2_TO_NLMPMC version:5.6.4 mode:remove_FC converted:07.06.2019

                Molecular medicine
                glutaminolysis,kras,lung cancer,nf1,psat1,cancer,metabolism,respiratory system
                Molecular medicine
                glutaminolysis, kras, lung cancer, nf1, psat1, cancer, metabolism, respiratory system

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