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      Protein aggregation and biomolecular condensation in hypoxic environments (Review)

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          Abstract

          Due to molecular forces, biomacromolecules assemble into liquid condensates or solid aggregates, and their corresponding formation and dissolution processes are controlled. Protein homeostasis is disrupted by increasing age or environmental stress, leading to irreversible protein aggregation. Hypoxic pressure is an important factor in this process, and uncontrolled protein aggregation has been widely observed in hypoxia-related conditions such as neurodegenerative disease, cardiovascular disease, hypoxic brain injury and cancer. Biomolecular condensates are also high-order complexes assembled from macromolecules. Although they exist in different phase from protein aggregates, they are in dynamic balance under certain conditions, and their activation or assembly are considered as important regulatory processes in cell survival with hypoxic pressure. Therefore, a better understanding of the relationship between hypoxic stress, protein aggregation and biomolecular condensation will bring marked benefits in the clinical treatment of various diseases. The aim of the present review was to summarize the underlying mechanisms of aggregate assembly and dissolution induced by hypoxic conditions, and address recent breakthroughs in understanding the role of aggregates in hypoxic-related diseases, given the hypotheses that hypoxia induces macromolecular assemblage changes from a liquid to a solid phase, and that adenosine triphosphate depletion and ATP-driven inactivation of multiple protein chaperones play important roles among the process. Moreover, it is anticipated that an improved understanding of the adaptation in hypoxic environments could extend the overall survival of patients and provide new strategies for hypoxic-related diseases.

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          Biomolecular condensates: organizers of cellular biochemistry

          In addition to membrane-bound organelles, eukaryotic cells feature various membraneless compartments, including the centrosome, the nucleolus and various granules. Many of these compartments form through liquid–liquid phase separation, and the principles, mechanisms and regulation of their assembly as well as their cellular functions are now beginning to emerge.
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            The unfolded protein response: from stress pathway to homeostatic regulation.

            The vast majority of proteins that a cell secretes or displays on its surface first enter the endoplasmic reticulum (ER), where they fold and assemble. Only properly assembled proteins advance from the ER to the cell surface. To ascertain fidelity in protein folding, cells regulate the protein-folding capacity in the ER according to need. The ER responds to the burden of unfolded proteins in its lumen (ER stress) by activating intracellular signal transduction pathways, collectively termed the unfolded protein response (UPR). Together, at least three mechanistically distinct branches of the UPR regulate the expression of numerous genes that maintain homeostasis in the ER or induce apoptosis if ER stress remains unmitigated. Recent advances shed light on mechanistic complexities and on the role of the UPR in numerous diseases.
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              Liquid phase condensation in cell physiology and disease.

              Phase transitions are ubiquitous in nonliving matter, and recent discoveries have shown that they also play a key role within living cells. Intracellular liquid-liquid phase separation is thought to drive the formation of condensed liquid-like droplets of protein, RNA, and other biomolecules, which form in the absence of a delimiting membrane. Recent studies have elucidated many aspects of the molecular interactions underlying the formation of these remarkable and ubiquitous droplets and the way in which such interactions dictate their material properties, composition, and phase behavior. Here, we review these exciting developments and highlight key remaining challenges, particularly the ability of liquid condensates to both facilitate and respond to biological function and how their metastability may underlie devastating protein aggregation diseases.
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                Author and article information

                Journal
                Int J Mol Med
                Int J Mol Med
                IJMM
                International Journal of Molecular Medicine
                D.A. Spandidos
                1107-3756
                1791-244X
                April 2024
                12 February 2024
                12 February 2024
                : 53
                : 4
                : 33
                Affiliations
                [1 ]School of Exercise and Health, Shanghai University of Sport, Shanghai 200438, P.R. China
                [2 ]Institute of Energy Metabolism and Health, Shanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai 200072, P.R. China
                Author notes
                Correspondence to: Professor Weihua Xiao, School of Exercise and Health, Shanghai University of Sport, 399 Changhai Road, Shanghai 200438, P.R. China, E-mail: xiao_weihua@ 123456163.com
                Article
                ijmm-53-04-05357
                10.3892/ijmm.2024.5357
                10903932
                38362920
                e8e07d7c-3cf9-448d-8aa2-8e34a5530f28
                Copyright: © Li et al.

                This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.

                History
                : 08 November 2023
                : 15 January 2024
                Funding
                Funded by: National Natural Science Foundation of China
                Award ID: 32371185
                Funded by: Shanghai Science and Technology Plan Project
                Award ID: 23010504200
                Funded by: Shanghai Talent Development Fund
                Award ID: 2020125
                Funded by: Key Lab of Exercise and Health Sciences of the Ministry of Education
                Award ID: 2022KF001
                Funded by: Shanghai Key Lab of Human Performance
                Award ID: 11DZ2261100
                The present review was sponsored by the National Natural Science Foundation of China (grant no. 32371185), the Shanghai Science and Technology Plan Project (grant no. 23010504200), the Shanghai Talent Development Fund (grant no. 2020125), the Key Lab of Exercise and Health Sciences of the Ministry of Education (Shanghai University of Sports; grant no. 2022KF001) and the Shanghai Key Lab of Human Performance (Shanghai University of Sports; grant no. 11DZ2261100).
                Categories
                Review

                biomolecular condensation,protein aggregation,phase separation,hypoxia,chaperonins

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