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      Contribution of trans regulatory eQTL to cryptic genetic variation in C. elegans.

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          Abstract

          Cryptic genetic variation (CGV) is the hidden genetic variation that can be unlocked by perturbing normal conditions. CGV can drive the emergence of novel complex phenotypes through changes in gene expression. Although our theoretical understanding of CGV has thoroughly increased over the past decade, insight into polymorphic gene expression regulation underlying CGV is scarce. Here we investigated the transcriptional architecture of CGV in response to rapid temperature changes in the nematode Caenorhabditis elegans. We analyzed regulatory variation in gene expression (and mapped eQTL) across the course of a heat stress and recovery response in a recombinant inbred population.

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          Author and article information

          Journal
          BMC Genomics
          BMC genomics
          Springer Science and Business Media LLC
          1471-2164
          1471-2164
          Jun 29 2017
          : 18
          : 1
          Affiliations
          [1 ] Laboratory of Nematology, Wageningen University and Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands.
          [2 ] Centre for Genome research, Institute of Integrative Biology, Biosciences Building, University of Liverpool, L69 7ZB, Liverpool, UK.
          [3 ] Laboratory of Nematology, Wageningen University and Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands. Jan.kammenga@wur.nl.
          Article
          10.1186/s12864-017-3899-8
          10.1186/s12864-017-3899-8
          5492678
          28662696
          f04de57b-ee8a-41fe-bde8-33fc17c78f22
          History

          Cryptic genetic variation,Genetical genomics,Heat stress,Trans-band,eQTL,eQTL hotspot,Caenorhabditis elegans

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