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      RSF1 in cancer: interactions and functions

      review-article
      1 , 1 , , 2 ,
      Cancer Cell International
      BioMed Central
      RSF1, H2Aub, NF-κB, CENP-A, PLK1, SNF2H

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          Abstract

          RSF1, remodelling and spacing factor 1, is an important interphase centromere protein and is overexpressed in many types of cancers and correlated with poor overall survival. RSF1 has functions mainly in maintaining chromosome stability, facilitating DNA repair, maintaining the protein homeostasis of RSF1 and suppressing the transcription of some oncogenes when RSF1 protein is expressed at an optimal level; however, RSF1 overexpression facilitates drug resistance and cell cycle checkpoint inhibition to prompt cancer proliferation and survival. The RSF1 expression level and gene background are crucial for RSF1 functions, which may explain why RSF1 has different functions in different cancer types. This review summarizes the functional domains of RSF1 , the overexpression status of RSF1 and SNF2H in cancer based on the TCGA and GTE X databases, the cancer-related functions of RSF1 in interacting with H2Aub, HDAC1, CENP-A, PLK1, ATM, CENP-S, SNF2H, HB X, BubR1, cyclin E1, CBP and NF-κB and the potential clinical value of RSF1, which will lay a theoretical foundation for the structural biology study of RSF1 and application of RSF1 inhibitors, truncated RSF1 proteins and SNF2H inhibitors in the treatment of RSF1-overexpressing tumours.

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          GEPIA2: an enhanced web server for large-scale expression profiling and interactive analysis

          Abstract Introduced in 2017, the GEPIA (Gene Expression Profiling Interactive Analysis) web server has been a valuable and highly cited resource for gene expression analysis based on tumor and normal samples from the TCGA and the GTEx databases. Here, we present GEPIA2, an updated and enhanced version to provide insights with higher resolution and more functionalities. Featuring 198 619 isoforms and 84 cancer subtypes, GEPIA2 has extended gene expression quantification from the gene level to the transcript level, and supports analysis of a specific cancer subtype, and comparison between subtypes. In addition, GEPIA2 has adopted new analysis techniques of gene signature quantification inspired by single-cell sequencing studies, and provides customized analysis where users can upload their own RNA-seq data and compare them with TCGA and GTEx samples. We also offer an API for batch process and easy retrieval of the analysis results. The updated web server is publicly accessible at http://gepia2.cancer-pku.cn/.
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            30 Years of NF-κB: A Blossoming of Relevance to Human Pathobiology.

            NF-κB was discovered 30 years ago as a rapidly inducible transcription factor. Since that time, it has been found to have a broad role in gene induction in diverse cellular responses, particularly throughout the immune system. Here, we summarize elaborate regulatory pathways involving this transcription factor and use recent discoveries in human genetic diseases to place specific proteins within their relevant medical and biological contexts.
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              Dissecting molecular cross-talk between Nrf2 and NF-κB response pathways

              In most tissues, cells are exposed to frequent changes in levels of oxidative stress and inflammation. Nuclear factor (erythroid-derived 2)-like 2 (Nrf2) and nuclear factor-κB (NF-κB) are the two key transcription factors that regulate cellular responses to oxidative stress and inflammation respectively. Pharmacological and genetic studies suggest that there is functional cross-talk between these two important pathways. The absence of Nrf2 can exacerbate NF-κB activity leading to increased cytokine production, whereas NF-κB can modulate Nrf2 transcription and activity, having both positive and negative effects on the target gene expression. This review focuses on the potentially complex molecular mechanisms that link the Nrf2 and NF-κB pathways and the importance of designing more effective therapeutic strategies to prevent or treat a broad range of neurological disorders.
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                Author and article information

                Contributors
                caigy@sj-hospital.org
                yangqing_sj@126.com
                sunwei042116@163.com , weisun@cmu.edu.cn
                Journal
                Cancer Cell Int
                Cancer Cell Int
                Cancer Cell International
                BioMed Central (London )
                1475-2867
                19 June 2021
                19 June 2021
                2021
                : 21
                : 315
                Affiliations
                [1 ]GRID grid.412467.2, ISNI 0000 0004 1806 3501, Department of Obstetrics and Gynecology, , Shengjing Hospital of China Medical University, ; Shenyang, China
                [2 ]GRID grid.412449.e, ISNI 0000 0000 9678 1884, Department of Key Laboratory of Cell Biology, Ministry of Public Health and Key Laboratory of Medical Cell Biology, School of Life Sciences, , China Medical University, ; Shenyang, China
                Author information
                http://orcid.org/0000-0001-5764-9159
                Article
                2012
                10.1186/s12935-021-02012-9
                8214769
                34147108
                f599eb49-a97e-45f2-9659-a51649ee765c
                © The Author(s) 2021

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

                History
                : 2 March 2021
                : 10 June 2021
                Funding
                Funded by: the National Natural Science Foundation of China
                Award ID: 81872125
                Award Recipient :
                Funded by: Outstanding Scientific Fund of Shengjing Hospital
                Award ID: 201704
                Award Recipient :
                Funded by: Science and technology research project of education department of Liaoning province
                Award ID: LK201632
                Award Recipient :
                Categories
                Review
                Custom metadata
                © The Author(s) 2021

                Oncology & Radiotherapy
                rsf1,h2aub,nf-κb,cenp-a,plk1,snf2h
                Oncology & Radiotherapy
                rsf1, h2aub, nf-κb, cenp-a, plk1, snf2h

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