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      Benefits and Limitations of DNA Barcoding and Metabarcoding in Herbal Product Authentication

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          Abstract

          Introduction

          Herbal medicines play an important role globally in the health care sector and in industrialised countries they are often considered as an alternative to mono‐substance medicines. Current quality and authentication assessment methods rely mainly on morphology and analytical phytochemistry‐based methods detailed in pharmacopoeias. Herbal products however are often highly processed with numerous ingredients, and even if these analytical methods are accurate for quality control of specific lead or marker compounds, they are of limited suitability for the authentication of biological ingredients.

          Objective

          To review the benefits and limitations of DNA barcoding and metabarcoding in complementing current herbal product authentication.

          Method

          Recent literature relating to DNA based authentication of medicinal plants, herbal medicines and products are summarised to provide a basic understanding of how DNA barcoding and metabarcoding can be applied to this field.

          Results

          Different methods of quality control and authentication have varying resolution and usefulness along the value chain of these products. DNA barcoding can be used for authenticating products based on single herbal ingredients and DNA metabarcoding for assessment of species diversity in processed products, and both methods should be used in combination with appropriate hyphenated chemical methods for quality control.

          Conclusions

          DNA barcoding and metabarcoding have potential in the context of quality control of both well and poorly regulated supply systems. Standardisation of protocols for DNA barcoding and DNA sequence‐based identification are necessary before DNA‐based biological methods can be implemented as routine analytical approaches and approved by the competent authorities for use in regulated procedures. © 2017 The Authors. Phytochemical Analysis Published by John Wiley & Sons Ltd.

          Abstract

          Herbal medicines play an important role globally in the health care sector and in industrialised countries they are often considered as an alternative to mono‐substance medicines. Different methods have varying resolution and usefulness along the value chain of these products. DNA barcoding can be used for authenticating products based on single herbal ingredients and DNA metabarcoding for assessment of species diversity in processed products, and both methods should be used in combination with appropriate hyphenated chemical methods for quality control.

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          Most cited references76

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          Cryptic species as a window on diversity and conservation.

          The taxonomic challenge posed by cryptic species (two or more distinct species classified as a single species) has been recognized for nearly 300 years, but the advent of relatively inexpensive and rapid DNA sequencing has given biologists a new tool for detecting and differentiating morphologically similar species. Here, we synthesize the literature on cryptic and sibling species and discuss trends in their discovery. However, a lack of systematic studies leaves many questions open, such as whether cryptic species are more common in particular habitats, latitudes or taxonomic groups. The discovery of cryptic species is likely to be non-random with regard to taxon and biome and, hence, could have profound implications for evolutionary theory, biogeography and conservation planning.
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            • Record: found
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            Is Open Access

            Discovery and resupply of pharmacologically active plant-derived natural products: A review

            Medicinal plants have historically proven their value as a source of molecules with therapeutic potential, and nowadays still represent an important pool for the identification of novel drug leads. In the past decades, pharmaceutical industry focused mainly on libraries of synthetic compounds as drug discovery source. They are comparably easy to produce and resupply, and demonstrate good compatibility with established high throughput screening (HTS) platforms. However, at the same time there has been a declining trend in the number of new drugs reaching the market, raising renewed scientific interest in drug discovery from natural sources, despite of its known challenges. In this survey, a brief outline of historical development is provided together with a comprehensive overview of used approaches and recent developments relevant to plant-derived natural product drug discovery. Associated challenges and major strengths of natural product-based drug discovery are critically discussed. A snapshot of the advanced plant-derived natural products that are currently in actively recruiting clinical trials is also presented. Importantly, the transition of a natural compound from a “screening hit” through a “drug lead” to a “marketed drug” is associated with increasingly challenging demands for compound amount, which often cannot be met by re-isolation from the respective plant sources. In this regard, existing alternatives for resupply are also discussed, including different biotechnology approaches and total organic synthesis. While the intrinsic complexity of natural product-based drug discovery necessitates highly integrated interdisciplinary approaches, the reviewed scientific developments, recent technological advances, and research trends clearly indicate that natural products will be among the most important sources of new drugs also in the future.
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              The promise of DNA barcoding for taxonomy.

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                Author and article information

                Contributors
                hugo.deboer@nhm.uio.no
                Journal
                Phytochem Anal
                Phytochem Anal
                10.1002/(ISSN)1099-1565
                PCA
                Phytochemical Analysis
                John Wiley and Sons Inc. (Hoboken )
                0958-0344
                1099-1565
                14 September 2017
                Mar-Apr 2018
                : 29
                : 2 ( doiID: 10.1002/pca.v29.2 )
                : 123-128
                Affiliations
                [ 1 ] Natural History Museum University of Oslo P.O. Box 1172, Blindern 0318 Oslo Norway
                [ 2 ] Stejarul Research Centre for Biological Sciences National Institute of Research and Development for Biological Sciences Alexandru cel Bun Street, 6 610004 Piatra Neamt Romania
                [ 3 ] Research Group of Pharmacognosy and Phytotherapy, Research Cluster ‘Biodiversity and Medicines’, UCL School of Pharmacy University of London 29–39 Brunswick Sq London WC1N 1AX UK
                Author notes
                [*] [* ] Correspondence to: Hugo de Boer, Natural History Museum, University of Oslo, P.O. Box 1172, Blindern, 0318 Oslo, Norway.

                Email: hugo.deboer@ 123456nhm.uio.no

                Author information
                http://orcid.org/0000-0003-1860-9984
                http://orcid.org/0000-0003-1985-7859
                Article
                PCA2732 PCA-17-0313.R1
                10.1002/pca.2732
                5836936
                28906059
                f9352243-cadc-43cb-ad6f-2a2ae269084b
                © 2017 The Authors. Phytochemical Analysis Published by John Wiley & Sons Ltd.

                This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                History
                : 07 August 2017
                : 23 August 2017
                : 26 August 2017
                Page count
                Figures: 1, Tables: 0, Pages: 6, Words: 3227
                Funding
                Funded by: Romanian ‐ EEA Research Programme
                Award ID: 2SEE/2014
                Funded by: EEA Financial Mechanism
                Award ID: 2SEE/2014
                Funded by: Romanian – EEA Research Programme
                Categories
                Review
                Review
                Custom metadata
                2.0
                pca2732
                March/April 2018
                Converter:WILEY_ML3GV2_TO_NLMPMC version:version=5.3.2.2 mode:remove_FC converted:05.03.2018

                authentication,dna barcoding,dna metabarcoding,herbal pharmacovigilance,herbal products,nmr metabolomics,quality,safety

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