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      Type IV secretion in Gram-negative and Gram-positive bacteria

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          Abstract

          Type IV secretion systems (T4SSs) are versatile multiprotein nanomachines spanning the entire bacterial cell envelope in Gram-negative and Gram-positive bacteria. They play important roles through the contact-dependent secretion of effector molecules into eukaryotic hosts and conjugative transfer of mobile DNA elements as well as contact-independent exchange of DNA with the extracellular milieu. In the last few years, many details on the molecular mechanisms of T4SSs have been elucidated. Exciting structures of T4SS complexes from Escherichia coli plasmids R388 and pKM101, Helicobacter pylori and Legionella pneumophila have been solved. The structure of the F-pilus was also reported and surprisingly revealed a filament composed of pilin subunits in 1:1 stoichiometry with phospholipid molecules. Many new T4SSs have been identified and characterized, underscoring the structural and functional diversity of this secretion superfamily. Complex regulatory circuits also have been shown to control T4SS machine production in response to host cell physiological status or a quorum of bacterial recipient cells in the vicinity. Here, we summarize recent advances in our knowledge of ‘paradigmatic’ and emerging systems, and further explore how new basic insights are aiding in the design of strategies aimed at suppressing T4SS functions in bacterial infections and spread of antimicrobial resistances.

          Abbreviated Summary

          Type IV secretion systems (T4SSs) are highly sophisticated nanomachines in the cell envelope of many bacteria. They exhibit crucial roles during infection of humans by the secretion of effector proteins, conjugative transfer of DNA and exchange of DNA with the extracellular environment. In this MicroReview, we summarize recent progress on T4SS composition, assembly and structure, and highlight how basic understanding of their functions is aiding in the design of novel strategies for antimicrobial therapies.

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          Most cited references186

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          Nod1 responds to peptidoglycan delivered by the Helicobacter pylori cag pathogenicity island.

          Epithelial cells can respond to conserved bacterial products that are internalized after either bacterial invasion or liposome treatment of cells. We report here that the noninvasive Gram-negative pathogen Helicobacter pylori was recognized by epithelial cells via Nod1, an intracellular pathogen-recognition molecule with specificity for Gram-negative peptidoglycan. Nod1 detection of H. pylori depended on the delivery of peptidoglycan to host cells by a bacterial type IV secretion system, encoded by the H. pylori cag pathogenicity island. Consistent with involvement of Nod1 in host defense, Nod1-deficient mice were more susceptible to infection by cag pathogenicity island-positive H. pylori than were wild-type mice. We propose that sensing of H. pylori by Nod1 represents a model for host recognition of noninvasive pathogens.
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            Biological diversity of prokaryotic type IV secretion systems.

            Type IV secretion systems (T4SS) translocate DNA and protein substrates across prokaryotic cell envelopes generally by a mechanism requiring direct contact with a target cell. Three types of T4SS have been described: (i) conjugation systems, operationally defined as machines that translocate DNA substrates intercellularly by a contact-dependent process; (ii) effector translocator systems, functioning to deliver proteins or other macromolecules to eukaryotic target cells; and (iii) DNA release/uptake systems, which translocate DNA to or from the extracellular milieu. Studies of a few paradigmatic systems, notably the conjugation systems of plasmids F, R388, RP4, and pKM101 and the Agrobacterium tumefaciens VirB/VirD4 system, have supplied important insights into the structure, function, and mechanism of action of type IV secretion machines. Information on these systems is updated, with emphasis on recent exciting structural advances. An underappreciated feature of T4SS, most notably of the conjugation subfamily, is that they are widely distributed among many species of gram-negative and -positive bacteria, wall-less bacteria, and the Archaea. Conjugation-mediated lateral gene transfer has shaped the genomes of most if not all prokaryotes over evolutionary time and also contributed in the short term to the dissemination of antibiotic resistance and other virulence traits among medically important pathogens. How have these machines adapted to function across envelopes of distantly related microorganisms? A survey of T4SS functioning in phylogenetically diverse species highlights the biological complexity of these translocation systems and identifies common mechanistic themes as well as novel adaptations for specialized purposes relating to the modulation of the donor-target cell interaction.
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              SHP-2 tyrosine phosphatase as an intracellular target of Helicobacter pylori CagA protein.

              Helicobacter pylori CagA protein is associated with severe gastritis and gastric carcinoma. CagA is injected from the attached Helicobacter pylori into host cells and undergoes tyrosine phosphorylation. Wild-type but not phosphorylation-resistant CagA induced a growth factor-like response in gastric epithelial cells. Furthermore, CagA formed a physical complex with the SRC homology 2 domain (SH2)-containing tyrosine phosphatase SHP-2 in a phosphorylation-dependent manner and stimulated the phosphatase activity. Disruption of the CagA-SHP-2 complex abolished the CagA-dependent cellular response. Conversely, the CagA effect on cells was reproduced by constitutively active SHP-2. Thus, upon translocation, CagA perturbs cellular functions by deregulating SHP-2.
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                Author and article information

                Journal
                8712028
                5753
                Mol Microbiol
                Mol. Microbiol.
                Molecular microbiology
                0950-382X
                1365-2958
                31 December 2017
                18 January 2018
                February 2018
                01 February 2019
                : 107
                : 4
                : 455-471
                Affiliations
                [1 ]Beuth University of Applied Sciences Berlin, Life Sciences and Technology, D-13347 Berlin, Germany
                [2 ]Department of Microbiology and Molecular Genetics, The University of Texas Medical School at Houston, 6431 Fannin St, Houston, Texas 77030, USA
                [3 ]Institute of Structural and Molecular Biology, University College London and Birkbeck College, London WC1E 7HX, United Kingdom
                [4 ]Friedrich Alexander University Erlangen-Nuremberg, Department of Biology, Division of Microbiology, Staudtstrasse 5, D-91058 Erlangen, Germany
                Author notes
                Article
                PMC5796862 PMC5796862 5796862 nihpa930906
                10.1111/mmi.13896
                5796862
                29235173
                47c11785-6fa9-4ebb-a6d4-234ef0ae2a73
                History
                Categories
                Article

                conjugation,coupling protein,pilus,core structure,T4CP,ATPase,T4SS,signal transduction,transfer DNA, oriT ,relaxosome,relaxase,3D-structure,killer toxin,anti-apoptosis,integrin,vacuole,intracellular trafficking,NTPase,type IV secretion,signaling,VirB/VirD4,CagA,mating pair formation,transfer genes,T-DNA,apoptosis,CEACAM,Dot/Icm

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