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      Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

      ,
      Nucleic Acids Research
      Oxford University Press (OUP)

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          Abstract

          Interactive Tree Of Life (http://itol.embl.de) is a web-based tool for the display, manipulation and annotation of phylogenetic trees. It is freely available and open to everyone. In addition to classical tree viewer functions, iTOL offers many novel ways of annotating trees with various additional data. Current version introduces numerous new features and greatly expands the number of supported data set types. Trees can be interactively manipulated and edited. A free personal account system is available, providing management and sharing of trees in user defined workspaces and projects. Export to various bitmap and vector graphics formats is supported. Batch access interface is available for programmatic access or inclusion of interactive trees into other web services.

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          Most cited references5

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          TreeView: an application to display phylogenetic trees on personal computers.

          R D Page (1996)
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            ATV: display and manipulation of annotated phylogenetic trees.

            A Tree Viewer (ATV) is a Java tool for the display and manipulation of annotated phylogenetic trees. It can be utilized both as a standalone application and as an applet in a web browser.
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              SmashCommunity: a metagenomic annotation and analysis tool.

              SmashCommunity is a stand-alone metagenomic annotation and analysis pipeline suitable for data from Sanger and 454 sequencing technologies. It supports state-of-the-art software for essential metagenomic tasks such as assembly and gene prediction. It provides tools to estimate the quantitative phylogenetic and functional compositions of metagenomes, to compare compositions of multiple metagenomes and to produce intuitive visual representations of such analyses. SmashCommunity source code and documentation are available at http://www.bork.embl.de/software/smash bork@embl.de Supplementary data are available at Bioinformatics online.
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                Author and article information

                Journal
                Nucleic Acids Research
                Nucleic Acids Research
                Oxford University Press (OUP)
                0305-1048
                1362-4962
                June 29 2011
                July 01 2011
                April 05 2011
                July 01 2011
                : 39
                : suppl
                : W475-W478
                Article
                10.1093/nar/gkr201
                293deb20-1957-4a1b-b989-a9c27c945790
                © 2011

                http://creativecommons.org/licenses/by-nc/2.5

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