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      An update on the occurrence of Paracoccidioides species in the Midwest region, Brazil: Molecular epidemiology, clinical aspects and serological profile of patients from Mato Grosso do Sul State

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          Abstract

          Background

          Paracoccidioidomycosis (PCM) is a systemic and endemic fungal infection in Latin American, mainly in Brazil. The majority of PCM cases occur in large areas in Brazil, comprising the South, Southeast and Midwest regions, with the latter demonstrating a higher incidence of the species Paracoccidioides lutzii.

          Methodology and main findings

          This study presents clinical, molecular and serological data of thirteen new PCM cases during 2016 to 2019 from the state of Mato Grosso do Sul, located in the Midwest region, Brazil. From these thirteen cases, sixteen clinical isolates were obtained and their genomic DNAs were subjected to genotyping by tub1 -PCR-RFLP. Results showed Paracoccidioides brasiliensis sensu stricto (S1) (11/16; 68.8%), Paracoccidioides restrepiensis (PS3) (4/16; 25.0%) and P. lutzii (1/16; 6.2%) as Paracoccidiodes species. Therefore, in order to understand whether the type of phylogenetic species that are circulating in the state influence the reactivity profile of serological tests, we performed double agar gel immunodiffusion (DID), using exoantigens from genotyped strains found in this series of PCM cases. Overall, our DID tests have been false negative in about 30% of confirmed PCM cases. All patients were male, most with current or previous rural activity, with ages ranging from 17 to 59 years, with 11 patients (84.6%) over 40 years of age. No clinical or epidemiological differences were found between Paracoccidioides species. However, it is important to note that the only case of P. lutzii died as an outcome.

          Conclusions

          This study suggests P. brasiliensis sensu stricto (S1) as the predominant species, showing its wide geographic distribution in Brazil. Furthermore, our findings revealed, for the first time, the occurrence of P. restrepiensis (PS3) in the state of Mato Grosso do Sul, Brazil. Despite our setbacks, it would be interesting to provide the complete sequencing of these clinical isolates to complement the molecular information presented.

          Author summary

          Paracoccidioides spp. complex and P. lutzii are etiological agents of paracoccidioidomycosis (PCM), one of the most important systemic mycosis of Latin America. This study aimed to describe the molecular epidemiology associated with clinical and serological data of Paracoccidiodes spp. in the Mato Grosso do Sul, located in the Midwest region, Brazil. Thus, for the first time in this state, the clinical Paracoccidioides species were molecularly identified. Previous findings have frequently been misinterpreted as proving that P. lutzii predominates in this region. In fact, we observed that this state differs from others in the Midwest, presenting a higher proportion of PCM cases due to P. brasiliensis sensu stricto (S1). In addition, we described the first report of P. restrepiensis (PS3) occurrence in the Brazilian Midwest region. Then, we presented an update on the occurrence of Paracoccidioides species in the Midwest region from Brazil. On the other hand, our results do not demonstrate clinical and epidemiological differences between Paracoccidioides spp. Nevertheless, this study reinforces that other researches should be carried out in order to evaluate an association of clinical manifestations and epidemiology with Paracoccidioides species.

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          Most cited references41

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          Paracoccidioidomycosis: an update.

          This review summarizes knowledge on various aspects of paracoccidioidomycosis. Mycelial propagules, chlamydospores, and arthroconidia exhibit thermal dimorphism; arthroconidia are infectious in animals and, by electron microscopy, appear well provided for survival. The mycelial-to-yeast-phase transformation requires a strict control of glucan synthesis probably mediated by membrane enzymes. Hormonal influences on the transformation of the fungus (mycelium or conidium to yeast phase) have been demonstrated. Estrogen-binding proteins have been detected in the fungal cytosol, and during the transformation novel proteins are produced as a result of estradiol incorporation. Clinical forms have been better defined on the basis of better experimental models. Emphasis has been placed on the lungs as the portal of entry and on the existence of silent pulmonary infections. A specific Paracoccidioides brasiliensis antigen, the 43-kDa glycoprotein (Gp43), has been identified, characterized, and cloned. This has led to improved reproducibility and specificity of serologic tests. The depression of cell-mediated immune responses has been associated with severe disease in humans and in the experimental host. T-cell subsets in patients' tissues were characterized by means of monoclonal antibodies, and a reduced CD4/CD8 ratio was demonstrated. This has been related to alterations in lymphokine and tumor necrosis factor production, production of antigen-antibody complexes, etc. Amphotericin B has provided effective therapy. Azole derivatives have also improved prognosis and facilitated therapy. Itraconazole is presently the drug of choice, yet incapacitating sequelae (mainly pulmonary fibrosis) still constitute major problems.
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            Brazilian guidelines for the clinical management of paracoccidioidomycosis

            Abstract Paracoccidioidomycosis is a systemic fungal disease occurring in Latin America that is associated with rural environments and agricultural activities. However, the incidence and prevalence of paracoccidiodomycosis is underestimated because of the lack of compulsory notification. If paracoccidiodomycosis is not diagnosed and treated early and adequately, the endemic fungal infection could result in serious sequelae. While the Paracoccidioides brasiliensis ( P. brasiliensis ) complex has been known to be the causal agent of paracoccidiodomycosis, a new species, Paracoccidioides lutzii ( P. lutzii ), has been reported in Rondônia, where the disease has reached epidemic levels, and in the Central West and Pará. Accurate diagnoses and availability of antigens that are reactive with the patients’ sera remain significant challenges. Therefore, the present guidelines aims to update the first Brazilian consensus on paracoccidioidomycosis by providing evidence-based recommendations for bedside patient management. This consensus summarizes etiological, ecoepidemiological, molecular epidemiological, and immunopathological data, with emphasis on clinical, microbiological, and serological diagnosis and management of clinical forms and sequelae, as well as in patients with comorbidities and immunosuppression. The consensus also includes discussion of outpatient treatments, severe disease forms, disease prevalence among special populations and resource-poor settings, a brief review of prevention and control measures, current challenges and recommendations.
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              Phylogenetic analysis reveals a high level of speciation in the Paracoccidioides genus.

              Paracoccidioidomycosis (PCM) is a systemic disease endemic to most of Latin America, with greatest impact in rural areas. The taxonomic status of one of the best studied Paracoccidioides isolates (Pb01) as P. brasiliensis remains unresolved due to its genomic differences from the other three previously described phylogenetic species (S1, PS2 and PS3; Carrero et al., 2008. Fungal Genet. Biol. 45, 605). Using the genealogic concordance method of phylogenetic species recognition (GCPSR) via maximum parsimony and Bayesian analysis, we identified a clade of 17 genotypically similar isolates, including Pb01, which are distinct from the S1/PS2/P3 clade. Consistent with GCPSR, this "Pb01-like" group can be considered a new phylogenetic species, since it is strongly supported by all independent and concatenated genealogies. "Pb01-like" species exhibit great sequence and morphological divergence from the S1/PS2/PS3 species clade, and we estimate that these groups last shared a common ancestor approximately 32 million years ago. In addition, recombination analysis revealed independent events inside both main groups suggesting reproductive isolation. Consequently, we recommend the formal description of the "Pb01-like" cluster as the new species Paracoccidioides lutzii, a tribute to Adolpho Lutz, discoverer of P. brasiliensis in 1908.
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                Author and article information

                Contributors
                Role: Data curationRole: InvestigationRole: Writing – original draft
                Role: Data curationRole: Writing – original draft
                Role: Data curationRole: Writing – original draft
                Role: ConceptualizationRole: Funding acquisitionRole: Investigation
                Role: InvestigationRole: Writing – review & editing
                Role: Data curationRole: Writing – review & editing
                Role: ConceptualizationRole: Data curationRole: Writing – review & editing
                Role: ConceptualizationRole: Funding acquisitionRole: InvestigationRole: SupervisionRole: Writing – review & editing
                Role: ConceptualizationRole: Funding acquisitionRole: InvestigationRole: SoftwareRole: Writing – original draft
                Role: Editor
                Journal
                PLoS Negl Trop Dis
                PLoS Negl Trop Dis
                plos
                plosntds
                PLoS Neglected Tropical Diseases
                Public Library of Science (San Francisco, CA USA )
                1935-2727
                1935-2735
                7 April 2021
                April 2021
                : 15
                : 4
                : e0009317
                Affiliations
                [1 ] Programa de Pós-Graduação em Doenças Infecciosas e Parasitárias, Faculdade de Medicina, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil
                [2 ] Departamento de Clínica Médica, Faculdade de Medicina de Ribeirão Preto (FMRP/USP), Universidade de São Paulo, São Paulo, Ribeirão Preto, Brazil
                [3 ] Laboratório de Biologia Molecular, Instituto de Ciências Biológicas, Universidade Federal de Goiás, Goiânia, Goiás, Brazil
                [4 ] Universidade Estadual Paulista (UNESP), Departamento de Bioestatística do Instituto de Biociência de Botucatu, Botucatu, São Paulo, Brazil
                [5 ] Universidade Estadual Paulista ‘Júlio Mesquita Filho’ (UNESP), Faculdade de Medicina de Botucatu, São Paulo, Brazil
                [6 ] Laboratório de Biociência (LaBio), Faculdade de Ciências Farmacêuticas, Alimentos e Nutrição, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil
                [7 ] Instituto de Ciências Exatas e Tecnologia (ICET), Universidade Federal do Amazonas, Itacoatiara, Amazonas, Brazil
                Universidade Federal do Para, BRAZIL
                Author notes

                The authors have declared that no competing interests exist.

                Author information
                https://orcid.org/0000-0003-1177-2092
                https://orcid.org/0000-0002-3306-3118
                https://orcid.org/0000-0003-0095-2215
                https://orcid.org/0000-0002-9914-8771
                https://orcid.org/0000-0003-0035-2439
                https://orcid.org/0000-0003-0575-2263
                https://orcid.org/0000-0002-8925-7712
                https://orcid.org/0000-0002-4181-142X
                Article
                PNTD-D-20-01595
                10.1371/journal.pntd.0009317
                8055028
                33826630
                10e77c9b-bd1e-48c0-9cd1-93a0d0184b32
                © 2021 Mattos et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 6 September 2020
                : 17 March 2021
                Page count
                Figures: 2, Tables: 2, Pages: 14
                Funding
                Funded by: funder-id http://dx.doi.org/10.13039/501100005672, Fundação de Apoio ao Desenvolvimento do Ensino, Ciência e Tecnologia do Estado de Mato Grosso do Sul;
                Award ID: FUNDECT/DECIT-MS/CNPq/SES No. 03/2016-PPSUS-MS
                Funded by: funder-id http://dx.doi.org/10.13039/501100005672, Fundação de Apoio ao Desenvolvimento do Ensino, Ciência e Tecnologia do Estado de Mato Grosso do Sul;
                Award ID: PPSUS/FUNDECT No.08/2020
                Award Recipient :
                Funded by: Instituto Nacional de Ciência e Tecnologia (INCT) de Estratégias de Interação Patógeno-Hospedeiro (IPH)
                Award ID: INCT–MCTI/CNPq/CAPES/FAPs n° 16/2014
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/501100002322, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior;
                Award ID: 88882.458447/2019-01
                Award Recipient :
                Funded by: Coordenação de Aperfeiçoamento de Pessoalde Nível Superior
                Award ID: 88882.180015/2018-01
                Award Recipient :
                Funded by: Universidade Federal de Mato Grosso do Sul (UFMS)
                Award ID: EDITALPROPP_RTR/UFMS 2021
                This work was supported by Fundação de Apoio ao Desenvolvimento do Ensino, Ciência e Tecnologia do Estado de Mato Grosso do Sul (FUNDECT/DECIT-MS/CNPq/SES No. 03/2016-PPSUS-MS and PPSUS/FUNDECT No.08/2020), and Instituto Nacional de Ciência e Tecnologia (INCT) de Estratégias de Interação Patógeno-Hospedeiro (IPH) (INCT–MCTI/CNPq/CAPES/FAPs n° 16/2014). This study was financed in part by the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior -Brasil (CAPES) - Finance Code 001. The doctoral grants were (KM grant numbers: 88882.458447/2019-01 and TAC grant numbers: 88882.180015/2018-01). The Universidade Federal de Mato Grosso do Sul (UFMS) supported of publication fee (EDITAL Nº 26/2021 PROP/UFMS).The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
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