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      Long non-coding RNA X-inactive specific transcript silencing ameliorates primary graft dysfunction following lung transplantation through microRNA-21-dependent mechanism

      research-article
      1 , 1 , * , , ,
      EBioMedicine
      Elsevier
      Long non-coding RNA, X-inactive specific transcript, Primary graft dysfunction, Interleukin-12a, MicroRNA-21, Neutrophil extracellular trap, Competing endogenous RNA, PGD, Primary graft dysfunction, ALI, acute lung injury, lncRNAs, long non-coding RNAs, miRNAs, microRNAs, XIST, X-inactive specific transcript, PMNs, polymorphonuclear neutrophils, ceRNA, competing endogenous RNA, NET, neutrophil extracellular trap, NSCLC, non-small cell lung cancer, 3′UTR, 3′untranslated region, IL, interleukin, TNFAIP1, tumor necrosis factor alpha-induced protein 1, ISHLT, International Society of Heart and Lung Transplantation, MGG, May-Grunwald-Giemsa, SD, Sprague-Dawley, PCI, prolonged cold ischemia, LV, lentiviral vectors, PBS, phosphate-buffered saline, HE, hematoxylin and eosin, LSM, lymphocyte separation medium, EP, Eppendorf, FITC, fluorescein isothiocyanate, mAb, monoclonal antibody, BSA, bovine serum albumin, OD, optical density, RT-qPCR, reverse transcription quantitative polymerase chain reaction, cDNA, complementary DNA, GAPDH, glyceraldehyde-3-phosphate dehydrogenase, PMSF, phenylmethylsulfonyl, SDS, sodium dodecyl sulfate, PVDF, polyvinylidene fluoride, TBST, Tris-buffered saline Tween-20, HRP, horseradish peroxidase, ECL, enhanced chemiluminescence, Mut, mutant, Wt, wild type, RIP, RNA binding protein immunoprecipitation

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          Abstract

          Background

          Primary graft dysfunction (PGD) is a known acute lung injury (ALI) and a major cause of fatality post-lung transplantation. Though some long non-coding RNAs (lncRNAs) have been studied in ALI through regulation of microRNAs (miRNAs), their effects on PGD remain undefined. The present study aims to explore the underlying mechanism of lncRNA X-inactive specific transcript (XIST) in PGD after lung transplantation.

          Methods

          Initially, the expression of miR-21, IL-12A and XIST was determined by RT-qPCR and western blot analysis. The dual luciferase reporter assay, RNA pull-down and RIP assay were performed to identify the targeting relationship between miR-21 and IL-12A and the binding relationship between miR-21 and XIST. Loss- and gain-of-function investigations were conducted in rats treated with prolonged cold ischemia and polymorphonuclear neutrophils (PMNs).

          Findings

          miR-21 was decreased, whilst XIST and IL-12A were increased in the bronchoalveolar lavage fluid of PGD patients after lung transplantation. Enhanced miR-21 expression in rats and PMNs resulted in downregulated expression of pro-inflammatory factors and chemokines, and enhanced the apoptosis of PMNs. XIST was found to upregulate IL-12A expression in a miR-21-dependent manner. Additionally, XIST silencing enhanced the apoptosis of PMNs and inhibited the neutrophil extracellular trap (NET) formation through upregulation of miR-21 but downregulation of IL-12A in vivo.

          Interpretation

          In summary, lncRNA XIST upregulates IL-12A by binding to miR-21, thereby inducing NET formation and accelerating PGD after lung transplantation. This suggests that inhibition of XIST and NET may be beneficial for the treatment of PGD.

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          Most cited references45

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          MicroRNA silencing for cancer therapy targeted to the tumor microenvironment

          SUMMARY PARAGRAPH MicroRNAs (miRNAs) are short non-coding RNAs expressed in different tissue and cell types that suppress the expression of target genes. As such, miRNAs are critical cogs in numerous biological processes 1,2 , and dysregulated miRNA expression is correlated with many human diseases. Certain miRNAs, called oncomiRs, play a causal role in the onset and maintenance of cancer when overexpressed. Tumors that depend on these miRNAs are said to display oncomiR addiction 3–5 . Some of the most effective anticancer therapies target oncogenes like EGFR and HER2; similarly, inhibition of oncomiRs using antisense oligomers (i.e. antimiRs) is an evolving therapeutic strategy 6,7 . However, the in vivo efficacy of current antimiR technologies is hindered by physiological and cellular barriers to delivery into targeted cells 8 . Here we introduce a novel antimiR delivery platform that targets the acidic tumor microenvironment, evades systemic clearance by the liver, and facilitates cell entry via a non-endocytic pathway. We found that the attachment of peptide nucleic acid (PNA) antimiRs to a peptide with a low pH-induced transmembrane structure (pHLIP) produced a novel construct that could target the tumor microenvironment, transport antimiRs across plasma membranes under acidic conditions such as those found in solid tumors (pH ~6), and effectively inhibit the miR-155 oncomiR in a mouse model of lymphoma. This study introduces a new paradigm in the use of antimiRs as anti-cancer drugs, which can have broad impacts on the field of targeted drug delivery.
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            Neutrophil extracellular traps are indirectly triggered by lipopolysaccharide and contribute to acute lung injury

            Neutrophil extracellular traps (NETs) facilitate the extracellular killing of pathogens. However, excessive NETs formation and poor degradation are associated with exacerbated immune responses and tissue injury. In this study, we investigated the role of NETs in lipopolysaccharide (LPS)-mediated acute lung injury (ALI) and assessed the use of DNase I, for the treatment of ALI. Additionally, we focused on the controversial issue of whether LPS directly induces NETs release in vitro. NETs formation was detected in murine ALI tissue in vivo and was associated with increased NETs markers, citrullinated-histone H3 tissue levels and NET-DNA levels in BALF. Treatment with DNase I significantly degraded NETs and reduced citrullinated-histone H3 levels, which protected against ALI and ameliorated pulmonary oedema and total protein in BALF. In addition, DNase I significantly reduced IL-6 and TNF-α levels in plasma and BALF. In vitro, LPS-activated platelets rather than LPS alone efficiently induced NETs release. In conclusion, NETs formed during LPS-induced ALI, caused organ damage and initiated the inflammatory response. NETs degradation by DNase I promoted NET-protein clearance and protected against ALI in mice; thus, DNase I may be a new potential adjuvant for ALI therapy. Specifically, LPS induced NETs formation in an indirect manner via platelets activation.
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              Long noncoding RNAs: novel insights into gastric cancer.

              Long non-coding RNAs (lncRNAs) are functional RNAs longer than 200 nucleotides. Recent advances in the non-protein coding part of human genome analysis have discovered extensive transcription of large RNA transcripts that lack coding protein function, termed non-coding RNA (ncRNA). It is becoming evident that lncRNAs may be an important class of pervasive genes involved in carcinogenesis and metastasis. However, the biological and molecular mechanisms of lncRNAs in diverse diseases are not yet fully understood. Thus, it is anticipated that more efforts should be made to clarify the lncRNA world. Moreover, accumulating evidence has demonstrated that many lncRNAs are dysregulated in gastric cancer (GC) and closely related to tumorigenesis, metastasis, and prognosis or diagnosis. In this review, we will briefly outline the regulation and functional role of lncRNAs in GC. Finally, we discussed the potential of lncRNAs as prospective novel targets in GC treatment and biomarkers for GC diagnosis.
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                Author and article information

                Contributors
                Journal
                EBioMedicine
                EBioMedicine
                EBioMedicine
                Elsevier
                2352-3964
                22 January 2020
                February 2020
                22 January 2020
                : 52
                : 102600
                Affiliations
                [0001]Department of Thoracic Surgery, Henan Provincial People's Hospital, Zhengzhou University People's Hospital, Henan University People's Hospital, Zhengzhou 450003, PR China
                Author notes
                [* ]Corresponding author. facefuture00114321@ 123456163.com
                [1]

                These authors are regarded as co-first authors.

                Article
                S2352-3964(19)30815-1 102600
                10.1016/j.ebiom.2019.102600
                6976928
                31981974
                2160f9d8-6b04-4b0f-8bf0-69a55aad50ce
                © 2019 Published by Elsevier B.V.

                This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

                History
                : 10 April 2019
                : 25 November 2019
                : 9 December 2019
                Categories
                Research paper

                long non-coding rna,x-inactive specific transcript,primary graft dysfunction,interleukin-12a,microrna-21,neutrophil extracellular trap,competing endogenous rna,pgd, primary graft dysfunction,ali, acute lung injury,lncrnas, long non-coding rnas,mirnas, micrornas,xist, x-inactive specific transcript,pmns, polymorphonuclear neutrophils,cerna, competing endogenous rna,net, neutrophil extracellular trap,nsclc, non-small cell lung cancer,3′utr, 3′untranslated region,il, interleukin,tnfaip1, tumor necrosis factor alpha-induced protein 1,ishlt, international society of heart and lung transplantation,mgg, may-grunwald-giemsa,sd, sprague-dawley,pci, prolonged cold ischemia,lv, lentiviral vectors,pbs, phosphate-buffered saline,he, hematoxylin and eosin,lsm, lymphocyte separation medium,ep, eppendorf,fitc, fluorescein isothiocyanate,mab, monoclonal antibody,bsa, bovine serum albumin,od, optical density,rt-qpcr, reverse transcription quantitative polymerase chain reaction,cdna, complementary dna,gapdh, glyceraldehyde-3-phosphate dehydrogenase,pmsf, phenylmethylsulfonyl,sds, sodium dodecyl sulfate,pvdf, polyvinylidene fluoride,tbst, tris-buffered saline tween-20,hrp, horseradish peroxidase,ecl, enhanced chemiluminescence,mut, mutant,wt, wild type,rip, rna binding protein immunoprecipitation

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