13
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Common origin of plasmid encoded alpha-hemolysin genes in Escherichia coli

      research-article
      1 , 1 ,
      BMC Microbiology
      BioMed Central

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Background

          Alpha (α)-hemolysin is a pore forming cytolysin and serves as a virulence factor in intestinal and extraintestinal pathogenic strains of E. coli. It was suggested that the genes encoding α-hemolysin ( hlyCABD) which can be found on the chromosome and plasmid, were acquired through horizontal gene transfer. Plasmid-encoded α- hly is associated with certain enterotoxigenic (ETEC), shigatoxigenic (STEC) and enteropathogenic E. coli (EPEC) strains. In uropathogenic E. coli (UPEC), the α- hly genes are located on chromosomal pathogenicity islands. Previous work suggested that plasmid and chromosomally encoded α- hly may have evolved independently. This was explored in our study.

          Results

          We have investigated 11 α- hly plasmids from animal and human ETEC, STEC and EPEC strains. The size of α- hly plasmids ranges from 48-157 kb and eight plasmids are conjugative. The regulatory gene ( hlyR) located upstream of the hlyCABD gene operon and an IS 911 element located downstream of hlyD are conserved. Chromosomally-encoded α- hly operons lack the hlyR and IS 911 elements. The DNA sequence of hlyC and hlyA divided the plasmid- and chromosomally-encoded α-hemolysins into two clusters. The plasmid-encoded α- hly genes could be further divided into three groups based on the insertion of IS 1 and IS 2 in the regulatory region upstream of the α- hly operon. Transcription of the hlyA gene was higher than the housekeeping icdA gene in all strains (rq 4.8 to 143.2). Nucleotide sequence analysis of a chromosomally located α- hly determinant in Enterobacter cloacae strain indicates that it originates from an E. coli α- hly plasmid.

          Conclusion

          Our data indicate that plasmids encoding α- hly in E. coli descended from a common ancestor independent of the plasmid size and the origin of the strains. Conjugative plasmids could contribute to the spread of the α- hly determinant to Enterobacter cloacae. The presence of IS-elements flanking the plasmid-encoded α- hly indicate that they might be mobile genetic elements.

          Related collections

          Most cited references39

          • Record: found
          • Abstract: found
          • Article: not found

          Rapid procedure for detection and isolation of large and small plasmids.

          Procedures are described for the detection and isolation of plasmids of various sizes (2.6 to 350 megadaltons) that are harbored in species of Agrobacterium, Rhizobium, Escherichia, Salmonella, Erwinia, Pseudomonas, and Xanthomonas. The method utilized the molecular characteristics of covalently closed circular deoxyribonucleic acid (DNA) that is released from cells under conditions that denature chromosomal DNA by using alkaline sodium dodecyl sulfate (pH 12.6) at elevated temperatures. Proteins and cell debris were removed by extraction with phenol-chloroform. Under these conditions chromosomal DNA concentrations were reduced or eliminated. The clarified extract was used directly for electrophoretic analysis. These procedures also permitted the selective isolation of plasmid DNA that can be used directly in nick translation, restriction endonuclease analysis, transformation, and DNA cloning experiments.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Estimation of evolutionary distance between nucleotide sequences.

            F Tajima, M Nei (1984)
            A mathematical formula for estimating the average number of nucleotide substitutions per site (delta) between two homologous DNA sequences is developed by taking into account unequal rates of substitution among different nucleotide pairs. Although this formula is obtained for the equal-input model of nucleotide substitution, computer simulations have shown that it gives a reasonably good estimate for a wide range of nucleotide substitution patterns as long as delta is equal to or smaller than 1. Furthermore, the frequency of cases to which the formula is inapplicable is much lower than that for other similar methods recently proposed. This point is illustrated using insulin genes. A statistical method for estimating the number of nucleotide changes due to deletion and insertion is also developed. Application of this method to globin gene data indicates that the number of nucleotide changes per site increases with evolutionary time but the pattern of the increase is quite irregular.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Virulence factors in Escherichia coli urinary tract infection.

              Uropathogenic strains of Escherichia coli are characterized by the expression of distinctive bacterial properties, products, or structures referred to as virulence factors because they help the organism overcome host defenses and colonize or invade the urinary tract. Virulence factors of recognized importance in the pathogenesis of urinary tract infection (UTI) include adhesins (P fimbriae, certain other mannose-resistant adhesins, and type 1 fimbriae), the aerobactin system, hemolysin, K capsule, and resistance to serum killing. This review summarizes the virtual explosion of information regarding the epidemiology, biochemistry, mechanisms of action, and genetic basis of these urovirulence factors that has occurred in the past decade and identifies areas in need of further study. Virulence factor expression is more common among certain genetically related groups of E. coli which constitute virulent clones within the larger E. coli population. In general, the more virulence factors a strain expresses, the more severe an infection it is able to cause. Certain virulence factors specifically favor the development of pyelonephritis, others favor cystitis, and others favor asymptomatic bacteriuria. The currently defined virulence factors clearly contribute to the virulence of wild-type strains but are usually insufficient in themselves to transform an avirulent organism into a pathogen, demonstrating that other as-yet-undefined virulence properties await discovery. Virulence factor testing is a useful epidemiological and research tool but as yet has no defined clinical role. Immunological and biochemical anti-virulence factor interventions are effective in animal models of UTI and hold promise for the prevention of UTI in humans.
                Bookmark

                Author and article information

                Journal
                BMC Microbiol
                BMC Microbiology
                BioMed Central
                1471-2180
                2010
                19 July 2010
                : 10
                : 193
                Affiliations
                [1 ]National Reference Laboratory for E. coli, Federal Institute for Risk Assessment (BfR), D12277 Berlin, Germany
                Article
                1471-2180-10-193
                10.1186/1471-2180-10-193
                2918590
                20637130
                2546090f-cf3a-4ab1-bb14-d52a18b5da11
                Copyright ©2010 Burgos and Beutin; licensee BioMed Central Ltd.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 30 March 2010
                : 19 July 2010
                Categories
                Research Article

                Microbiology & Virology
                Microbiology & Virology

                Comments

                Comment on this article