Inviting an author to review:
Find an author and click ‘Invite to review selected article’ near their name.
Search for authorsSearch for similar articles
0
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Serotype distribution of invasive, non-invasive and carried Streptococcus pneumoniae in Malaysia: a meta-analysis

      review-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Background

          Pneumococcal pneumonia is the leading cause of under-five mortality globally. The surveillance of pneumococcal serotypes is therefore vital for informing pneumococcal vaccination policy and programmes. Pneumococcal conjugate vaccines (PCVs) have been available as an option in the private healthcare setting and beginning December 2020, PCV10 was incorporated as part of routine national immunisation programme (NIP) in Malaysia. We searched existing literature on pneumococcal serotype distribution across Malaysia to provide an overall view of this distribution before the implementation of PCV10.

          Methods

          Online databases (PubMed, Ovid MEDLINE and Scopus), reference lists of articles identified, and grey literature (Malaysian Ministry of Health website, WHO website) were systematically searched for relevant literature on pneumococcal serotype distribution across Malaysia up to 10th November 2020. No lower date limit was set to maximise the number of target reports returned. Results of serotypes were split by age categories, including ≤5 years, > 5 years and unreported for those that did not specify.

          Results

          The search returned 18 relevant results, with a total of 2040 isolates. The most common serotypes across all disease types were 19F ( n = 313, 15.3% [95%CI: 13.8–17.0]), 23F ( n = 166, 8.1% [95%CI: 7.0–9.4]), 14 (n = 166, 8.1% [95%CI: 7.0–9.4]), 6B ( n = 163, 8.0% [95%CI: 6.9–9.2]) and 19A ( n = 138, 6.8% [95%CI: 5.8–7.9]).

          Conclusion

          Four of the most common serotypes across all isolate sources in Malaysia are covered by PCV10, while PCV13 provides greater serotype coverage in comparison to PCV10. There is still a need for surveillance studies, particularly those investigating serotypes in children under 5 years of age, to monitor vaccine effectiveness and pneumococcal population dynamic following implementation of PCV10 into routine immunisation.

          Related collections

          Most cited references43

          • Record: found
          • Abstract: found
          • Article: not found

          Effect of use of 13-valent pneumococcal conjugate vaccine in children on invasive pneumococcal disease in children and adults in the USA: analysis of multisite, population-based surveillance.

          In 2000, seven-valent pneumococcal conjugate vaccine (PCV7) was introduced in the USA and resulted in dramatic reductions in invasive pneumococcal disease (IPD) and moderate increases in non-PCV7 type IPD. In 2010, PCV13 replaced PCV7 in the US immunisation schedule. We aimed to assess the effect of use of PCV13 in children on IPD in children and adults in the USA.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Standard method for detecting upper respiratory carriage of Streptococcus pneumoniae: updated recommendations from the World Health Organization Pneumococcal Carriage Working Group.

            In 2003 the World Health Organization (WHO) convened a working group and published a set of standard methods for studies measuring nasopharyngeal carriage of Streptococcus pneumoniae (the pneumococcus). The working group recently reconvened under the auspices of the WHO and updated the consensus standard methods. These methods describe the collection, transport and storage of nasopharyngeal samples, as well as provide recommendations for the identification and serotyping of pneumococci using culture and non-culture based approaches. We outline the consensus position of the working group, the evidence supporting this position, areas worthy of future research, and the epidemiological role of carriage studies. Adherence to these methods will reduce variability in the conduct of pneumococcal carriage studies undertaken in the context of pneumococcal vaccine trials, implementation studies, and epidemiology studies more generally so variability in methodology does not confound the interpretation of study findings. Copyright © 2013 Elsevier Ltd. All rights reserved.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Sequential multiplex PCR approach for determining capsular serotypes of Streptococcus pneumoniae isolates.

              Accurate serotyping is essential to monitor the changes in the seroepidemiology of Streptococcus pneumoniae. We devised a simple and schematic sequence-based system of seven multiplex PCRs, in a sequence order based upon Active Bacterial Core surveillance (ABCs) serotype distribution during 2002 to 2003, to reliably deduce specific pneumococcal serotypes. A total of 421 isolates from ABCs were randomly chosen to evaluate this system. Two hundred twenty-nine of the isolates (54.3%) were specifically assigned 1 of 17 serotypes by the multiplex PCR system, with the results in complete concordance with conventional serotyping. One hundred seventy-two additional isolates (40.9%) were assigned to 11 specific sets of 2 to 4 serotypes that with one exception (serotypes 6A and 6B) consisted of the single frequently occurring targeted serotype and 1 to 3 additional rare serotypes primarily within the same serogroup as the targeted serotype. Only 20 isolates (4.8%) could not be assigned specific serotypes or serotype sets, since they were either of rare serotypes not included in the assay design or were nonserotypeable. Overall, we found this system to be highly reliable, with the potential to greatly reduce our reliance upon conventional serotyping. Especially important is the capability of this system to give serotype-determining potential to any facility that lacks the expensive typing sera and expertise needed for conventional serotyping yet has the modest equipment necessary for DNA amplification and electrophoresis.
                Bookmark

                Author and article information

                Contributors
                s.c.clarke@soton.ac.uk
                Journal
                Pneumonia (Nathan)
                Pneumonia (Nathan)
                Pneumonia
                BioMed Central (London )
                2200-6133
                25 May 2021
                25 May 2021
                2021
                : 13
                : 9
                Affiliations
                [1 ]GRID grid.123047.3, ISNI 0000000103590315, Faculty of Medicine and Institute for Life Sciences, Infectious Disease Epidemiology Group, University of Southampton, Mailpoint 814, Level C, Sir Henry Wellcome Laboratories, South Block, , University Hospital Southampton Foundation NHS Trust, ; Southampton, SO16 6YD UK
                [2 ]GRID grid.440435.2, School of Biosciences, Faculty of Science and Engineering, , University of Nottingham Malaysia, ; Jalan Broga, 43500 Semenyih, Selangor Malaysia
                [3 ]GRID grid.412261.2, ISNI 0000 0004 1798 283X, Department of Biological Science, Faculty of Science, , Universiti Tunku Abdul Rahman (UTAR), ; Kampar Campus, 31900 Kampar, Perak Malaysia
                [4 ]GRID grid.11142.37, ISNI 0000 0001 2231 800X, Department of Biomedical Sciences, Faculty of Medicine and Health Sciences, , Universiti Putra Malaysia, ; 43400 Serdang, Selangor Malaysia
                [5 ]GRID grid.123047.3, ISNI 0000000103590315, NIHR Southampton Biomedical Research Centre, , University Hospital Southampton Foundation NHS Trust, ; Southampton, UK
                [6 ]GRID grid.5491.9, ISNI 0000 0004 1936 9297, Global Health Research Institute, , University of Southampton, ; Southampton, UK
                [7 ]GRID grid.411729.8, ISNI 0000 0000 8946 5787, Institute for Research, Development and Innovation, , International Medical University, ; Kuala Lumpur, Malaysia
                Author information
                http://orcid.org/0000-0003-1146-9093
                Article
                86
                10.1186/s41479-021-00086-7
                8147341
                34030731
                28069232-1024-4695-bce5-71477ccd933e
                © The Author(s) 2021

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 19 January 2021
                : 12 April 2021
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/100010897, Newton Fund;
                Award ID: 172686537
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/100011722, Higher Education Funding Council for England;
                Categories
                Review
                Custom metadata
                © The Author(s) 2021

                pneumococcal disease,national immunisation programme,vaccine types,pcv10,pcv13,pneumonia,vaccine,serotype,antimicrobial resistance

                Comments

                Comment on this article