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      Blood flow controls coagulation onset via the positive feedback of factor VII activation by factor Xa

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          Abstract

          Background

          Blood coagulation is a complex network of biochemical reactions, which is peculiar in that it is time- and space-dependent, and has to function in the presence of rapid flow. Recent experimental reports suggest that flow plays a significant role in its regulation. The objective of this study was to use systems biology techniques to investigate this regulation and to identify mechanisms creating a flow-dependent switch in the coagulation onset.

          Results

          Using a detailed mechanism-driven model of tissue factor (TF)-initiated thrombus formation in a two-dimensional channel we demonstrate that blood flow can regulate clotting onset in the model in a threshold-like manner, in agreement with existing experimental evidence. Sensitivity analysis reveals that this is achieved due to a combination of the positive feedback of TF-bound factor VII activation by activated factor X (Xa) and effective removal of factor Xa by flow from the activating patch depriving the feedback of "ignition". The level of this trigger (i.e. coagulation sensitivity to flow) is controlled by the activity of tissue factor pathway inhibitor.

          Conclusions

          This mechanism explains the difference between red and white thrombi observed in vivo at different shear rates. It can be speculated that this is a special switch protecting vascular system from uncontrolled formation and spreading of active coagulation factors in vessels with rapidly flowing blood.

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          Most cited references22

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          Coagulation 2006: a modern view of hemostasis.

          The authors propose that hemostasis occurs in a stepwise process, regulated by cellular components in vivo. The effectiveness of hemostasis in vivo depends not only on the procoagulant reactions but also on the fibrinolytic process. Causes of coagulopathic bleeding include consumption of coagulation factors and platelets, excessive fibrinolysis, hypothermia, and acidosis. Generation of the right amount of thrombin during the coagulation process not only may be essential for effective hemostasis but also may set the stage for effective wound healing.
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            Virchow’s Triad Revisited: Abnormal Flow

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              Inner clot diffusion and permeation during fibrinolysis.

              A model of fibrinolysis was developed using multicomponent convection-diffusion equations with homogeneous reaction and heterogeneous adsorption and reaction. Fibrin is the dissolving stationary phase and plasminogen, tissue plasminogen activator (tPA), urokinase (uPA), and plasmin are the soluble mobile species. The model is based on an accurate molecular description of the fibrin fiber and protofibril structure and contains no adjustable parameters and one phenomenological parameter estimated from experiment. The model can predict lysis fronts moving across fibrin clots (fine or coarse fibers) of various densities under different administration regimes using uPA and tPA. We predict that pressure-driven permeation is the major mode of transport that allows for kinetically significant thrombolysis during clinical situations. Without permeation, clot lysis would be severely diffusion limited and would require hundreds of minutes. Adsorption of tPA to fibrin under conditions of permeation was a nonequilibrium process that tended to front load clots with tPA. Protein engineering efforts to design optimal thrombolytics will likely be affected by the permeation processes that occur during thrombolysis.
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                Author and article information

                Journal
                BMC Syst Biol
                BMC Systems Biology
                BioMed Central
                1752-0509
                2010
                26 January 2010
                : 4
                : 5
                Affiliations
                [1 ]National Research Center for Hematology, 4a Novyi Zykovskii pr., Moscow 125167, Russia
                [2 ]Albert Eye Research Institute, Duke University Medical Center, Durham, North Carolina 27710, USA
                [3 ]Center for Theoretical Problems of Physicochemical Pharmacology, 4 Kosygina str., Moscow 119991, Russia
                [4 ]Department of Physics, Moscow State University, 1 Vorobyevy gory, Moscow 119991, Russia
                Article
                1752-0509-4-5
                10.1186/1752-0509-4-5
                2823678
                20102623
                31390fe6-8e8a-4387-bc84-50c49eb9f390
                Copyright ©2010 Shibeko et al; licensee BioMed Central Ltd.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 17 August 2009
                : 26 January 2010
                Categories
                Research article

                Quantitative & Systems biology
                Quantitative & Systems biology

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