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      Toward open sharing of task-based fMRI data: the OpenfMRI project

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          Abstract

          The large-scale sharing of task-based functional neuroimaging data has the potential to allow novel insights into the organization of mental function in the brain, but the field of neuroimaging has lagged behind other areas of bioscience in the development of data sharing resources. This paper describes the OpenFMRI project (accessible online at http://www.openfmri.org), which aims to provide the neuroimaging community with a resource to support open sharing of task-based fMRI studies. We describe the motivation behind the project, focusing particularly on how this project addresses some of the well-known challenges to sharing of task-based fMRI data. Results from a preliminary analysis of the current database are presented, which demonstrate the ability to classify between task contrasts with high generalization accuracy across subjects, and the ability to identify individual subjects from their activation maps with moderately high accuracy. Clustering analyses show that the similarity relations between statistical maps have a somewhat orderly relation to the mental functions engaged by the relevant tasks. These results highlight the potential of the project to support large-scale multivariate analyses of the relation between mental processes and brain function.

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          Most cited references35

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          Competition between functional brain networks mediates behavioral variability.

          Increased intraindividual variability (IIV) is a hallmark of disorders of attention. Recent work has linked these disorders to abnormalities in a "default mode" network, comprising brain regions routinely deactivated during goal-directed cognitive tasks. Findings from a study of the neural basis of attentional lapses suggest that a competitive relationship between the "task-negative" default mode network and regions of a "task-positive" attentional network is a potential locus of dysfunction in individuals with increased IIV. Resting state studies have shown that this competitive relationship is intrinsically represented in the brain, in the form of a negative correlation or antiphase relationship between spontaneous activity occurring in the two networks. We quantified the negative correlation between these two networks in 26 subjects, during active (Eriksen flanker task) and resting state scans. We hypothesized that the strength of the negative correlation is an index of the degree of regulation of activity in the default mode and task-positive networks and would be positively related to consistent behavioral performance. We found that the strength of the correlation between the two networks varies across individuals. These individual differences appear to be behaviorally relevant, as interindividual variation in the strength of the correlation was significantly related to individual differences in response time variability: the stronger the negative correlation (i.e., the closer to 180 degrees antiphase), the less variable the behavioral performance. This relationship was moderately consistent across resting and task conditions, suggesting that the measure indexes moderately stable individual differences in the integrity of functional brain networks. We discuss the implications of these findings for our understanding of the behavioral significance of spontaneous brain activity, in both healthy and clinical populations.
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            The neural basis of loss aversion in decision-making under risk.

            People typically exhibit greater sensitivity to losses than to equivalent gains when making decisions. We investigated neural correlates of loss aversion while individuals decided whether to accept or reject gambles that offered a 50/50 chance of gaining or losing money. A broad set of areas (including midbrain dopaminergic regions and their targets) showed increasing activity as potential gains increased. Potential losses were represented by decreasing activity in several of these same gain-sensitive areas. Finally, individual differences in behavioral loss aversion were predicted by a measure of neural loss aversion in several regions, including the ventral striatum and prefrontal cortex.
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              Functional connectivity density mapping.

              Brain networks with energy-efficient hubs might support the high cognitive performance of humans and a better understanding of their organization is likely of relevance for studying not only brain development and plasticity but also neuropsychiatric disorders. However, the distribution of hubs in the human brain is largely unknown due to the high computational demands of comprehensive analytical methods. Here we propose a 10(3) times faster method to map the distribution of the local functional connectivity density (lFCD) in the human brain. The robustness of this method was tested in 979 subjects from a large repository of MRI time series collected in resting conditions. Consistently across research sites, a region located in the posterior cingulate/ventral precuneus (BA 23/31) was the area with the highest lFCD, which suggest that this is the most prominent functional hub in the brain. In addition, regions located in the inferior parietal cortex (BA 18) and cuneus (BA 18) had high lFCD. The variability of this pattern across subjects was <36% and within subjects was 12%. The power scaling of the lFCD was consistent across research centers, suggesting that that brain networks have a "scale-free" organization.
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                Author and article information

                Journal
                Front Neuroinform
                Front Neuroinform
                Front. Neuroinform.
                Frontiers in Neuroinformatics
                Frontiers Media S.A.
                1662-5196
                08 July 2013
                2013
                : 7
                : 12
                Affiliations
                [1] 1Imaging Research Center, University of Texas Austin, TX, USA
                [2] 2Department of Psychology, Washington University St. Louis, MO, USA
                [3] 3Department of Psychology, Harvard University Cambridge, MA, USA
                [4] 4Department of Psychology, University of Colorado Boulder, CO, USA
                [5] 5Department of Psychology and Neurosciences Program, Stanford University Stanford, CA, USA
                [6] 6Cognitive, Perceptual and Brain Sciences, University College London London, UK
                [7] 7Electrical and Computer Engineering, University of Texas Austin, TX, USA
                [8] 8Center for the Developing Brain, Child Mind Institute New York, NY, USA
                Author notes

                Edited by: Daniel Gardner, Weill Cornell Medical College, USA

                Reviewed by: John Van Horn, University of California at Los Angeles, USA; David N. Kennedy, University of Massachusetts Medical School, USA; Robert Dougherty, S-Dougherty Law Offices, USA

                *Correspondence: Russell A. Poldrack, Imaging Research Center, University of Texas, 100 E. 24th St., Austin, 78712 TX, USA e-mail: poldrack@ 123456gmail.com
                Article
                10.3389/fninf.2013.00012
                3703526
                23847528
                352e0a71-9d07-4051-9c44-980181d0df04
                Copyright © 2013 Poldrack, Barch, Mitchell, Wager, Wagner, Devlin, Cumba, Koyejo and Milham.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc.

                History
                : 14 January 2013
                : 03 June 2013
                Page count
                Figures: 4, Tables: 2, Equations: 0, References: 54, Pages: 12, Words: 9158
                Categories
                Neuroscience
                Methods Article

                Neurosciences
                informatics,data sharing,metadata,multivariate,classification
                Neurosciences
                informatics, data sharing, metadata, multivariate, classification

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