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      Bilayer-Mediated Structural Transitions Control Mechanosensitivity of the TREK-2 K2P Channel

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          Summary

          The mechanosensitive two-pore domain (K2P) K + channels (TREK-1, TREK-2, and TRAAK) are important for mechanical and thermal nociception. However, the mechanisms underlying their gating by membrane stretch remain controversial. Here we use molecular dynamics simulations to examine their behavior in a lipid bilayer. We show that TREK-2 moves from the “down” to “up” conformation in direct response to membrane stretch, and examine the role of the transmembrane pressure profile in this process. Furthermore, we show how state-dependent interactions with lipids affect the movement of TREK-2, and how stretch influences both the inner pore and selectivity filter. Finally, we present functional studies that demonstrate why direct pore block by lipid tails does not represent the principal mechanism of mechanogating. Overall, this study provides a dynamic structural insight into K2P channel mechanosensitivity and illustrates how the structure of a eukaryotic mechanosensitive ion channel responds to changes in forces within the bilayer.

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          Highlights

          • Mechanogating of TREK-2 involves movement from the down to up conformation

          • Simulations sample a wide range of mechanosensitive K2P channel structures

          • Changes in the pressure profile and state-dependent lipid interactions play a key role

          • Lipid block of the inner pore does not mediate stretch activation

          Abstract

          Aryal et al. use MD simulations to understand stretch activation of the mechanosensitive K2P channel, TREK-2. They demonstrate how a change in forces within the bilayer drives movement between different conformations, and investigate the role that lipids play in this process.

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          Most cited references49

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          Canonical sampling through velocity-rescaling

          We present a new molecular dynamics algorithm for sampling the canonical distribution. In this approach the velocities of all the particles are rescaled by a properly chosen random factor. The algorithm is formally justified and it is shown that, in spite of its stochastic nature, a quantity can still be defined that remains constant during the evolution. In numerical applications this quantity can be used to measure the accuracy of the sampling. We illustrate the properties of this new method on Lennard-Jones and TIP4P water models in the solid and liquid phases. Its performance is excellent and largely independent on the thermostat parameter also with regard to the dynamic properties.
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            Molecular background of leak K+ currents: two-pore domain potassium channels.

            Two-pore domain K(+) (K(2P)) channels give rise to leak (also called background) K(+) currents. The well-known role of background K(+) currents is to stabilize the negative resting membrane potential and counterbalance depolarization. However, it has become apparent in the past decade (during the detailed examination of the cloned and corresponding native K(2P) channel types) that this primary hyperpolarizing action is not performed passively. The K(2P) channels are regulated by a wide variety of voltage-independent factors. Basic physicochemical parameters (e.g., pH, temperature, membrane stretch) and also several intracellular signaling pathways substantially and specifically modulate the different members of the six K(2P) channel subfamilies (TWIK, TREK, TASK, TALK, THIK, and TRESK). The deep implication in diverse physiological processes, the circumscribed expression pattern of the different channels, and the interesting pharmacological profile brought the K(2P) channel family into the spotlight. In this review, we focus on the physiological roles of K(2P) channels in the most extensively investigated cell types, with special emphasis on the molecular mechanisms of channel regulation.
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              Mechanically Activated Ion Channels.

              Mechanotransduction, the conversion of physical forces into biochemical signals, is essential for various physiological processes such as the conscious sensations of touch and hearing, and the unconscious sensation of blood flow. Mechanically activated (MA) ion channels have been proposed as sensors of physical force, but the identity of these channels and an understanding of how mechanical force is transduced has remained elusive. A number of recent studies on previously known ion channels along with the identification of novel MA ion channels have greatly transformed our understanding of touch and hearing in both vertebrates and invertebrates. Here, we present an updated review of eukaryotic ion channel families that have been implicated in mechanotransduction processes and evaluate the qualifications of the candidate genes according to specified criteria. We then discuss the proposed gating models for MA ion channels and highlight recent structural studies of mechanosensitive potassium channels.
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                Author and article information

                Contributors
                Journal
                Structure
                Structure
                Structure(London, England:1993)
                Cell Press
                0969-2126
                1878-4186
                02 May 2017
                02 May 2017
                : 25
                : 5
                : 708-718.e2
                Affiliations
                [1 ]Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, UK
                [2 ]Department of Biochemistry, University of Oxford, Oxford OX1 3QU, UK
                [3 ]OXION Initiative in Ion Channels and Disease, University of Oxford, Oxford OX1 3PT, UK
                [4 ]Department of Physiology, University of Kiel, 24118 Kiel, Germany
                [5 ]Structural Genomics Consortium, University of Oxford, Oxford OX3 7DQ, UK
                Author notes
                []Corresponding author mark.sansom@ 123456bioch.ox.ac.uk
                [∗∗ ]Corresponding author stephen.tucker@ 123456physics.ox.ac.uk
                [6]

                Present address: Department of Physiology and Biophysics, University of Colorado Anschutz Medical Center, Denver, CO 80045, USA

                [7]

                Lead Contact

                Article
                S0969-2126(17)30066-7
                10.1016/j.str.2017.03.006
                5415359
                28392258
                44b34411-5cff-41a7-bcd5-f25605fd301a
                © 2017 The Authors

                This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

                History
                : 16 December 2016
                : 1 February 2017
                : 10 March 2017
                Categories
                Article

                Molecular biology
                k2p channel,kcnk10,kcnk4,kcnk2,trek-2,mechanosensitive,k+ channel gating
                Molecular biology
                k2p channel, kcnk10, kcnk4, kcnk2, trek-2, mechanosensitive, k+ channel gating

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