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      Association between single-nucleotide polymorphisms and adverse events in nivolumab-treated non-small cell lung cancer patients

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          Abstract

          Background

          Treatment with PD-1 inhibitors can be hampered by severe auto-immune-related toxicities. Our objective was to identify single-nucleotide polymorphisms (SNPs) in genes previously associated with auto-immunity, which are associated with toxicities in nivolumab-treated NSCLC patients. This was in order to identify patients prone to develop severe toxicities and to gain more insight into the underlying pathobiology.

          Methods

          We analysed 322 nivolumab-treated patients and assessed the association with toxicities for seven SNPs in four genes, which are considered contributors to PD-1-directed T-cell responses, i.e., PDCD1, PTPN11, ZAP70 and IFNG. Every SNP was tested for its association with toxicity endpoints. Significant associations were tested in a validation cohort.

          Results

          A multivariable analysis in the exploration cohort showed that homozygous variant patients for PDCD1 804C>T (rs2227981) had decreased odds for any grade treatment-related toxicities ( n = 96; OR 0.4; 95% CI 0.2–1.0; p = 0.039). However, this result could not be validated ( n = 85; OR 0.9; 95% CI 0.4–1.9; p = NS).

          Conclusions

          Our results show that it is unlikely that the investigated SNPs have a clinical implication in predicting toxicity. A finding, even though negative, that is considered timely and instructive towards further research in biomarker development for checkpoint inhibitor treatments.

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          Most cited references10

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          Genetic association studies: design, analysis and interpretation.

          This paper provides a review of the design and analysis of genetic association studies. In case control studies, the different contingency tables and their relationships to the underlying genetic model are defined. Population stratification is discussed, with suggested methods to identify and correct for the effect. The transmission disequilibrium test is provided as an alternative family-based test, which is robust to population stratification. The relative benefits of each analysis are summarised.
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            Interferon-gamma gene polymorphisms associated with susceptibility to systemic lupus erythematosus.

            Interferon-gamma (IFNG) is a type II interferon playing diverse roles in innate and adaptive immune systems. Elevated expression of IFNG has been associated with systemic lupus erythematosus (SLE). This study examined the association of IFNG polymorphisms with SLE susceptibility. Five tag single-nucleotide polymorphisms (SNP) and eight variations in all known regulatory sequences affecting IFNG expression within and around IFNG were genotyped in 1759 unrelated Korean subjects. SLE susceptibility association was assessed by comparing 742 SLE patients and 1017 unaffected controls using multivariate logistic regression analysis with adjustment for age and gender. SLE susceptibility association was significant with rs2069705 in the promoter (adjusted OR 2.27, p=0.0024) and marginal with rs3181032 in the promoter (p=0.037), rs2430561 in intron 1 (p=0.022) and rs2069718 in intron 3 (p=0.026) in a recessive genetic model. Five other SNP showed no association and four other variations were not polymorphic. Several SNP in IFNG are associated with SLE susceptibility, and the risk allele of an associated SNP (rs2430561) located in an NF-kappaB binding site has elevated IFNG expression versus the non-risk allele, supporting that elevated IFNG expression is associated with increased SLE susceptibility.
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              TCR-engineered T cells to treat tumors: Seeing but not touching?

              Adoptive transfer of T cells gene-engineered with T cell receptors (TCRs) has proven its feasibility and therapeutic potential in the treatment of malignant tumors. To ensure further clinical development of TCR gene therapy, it is necessary to accurately select TCRs that demonstrate antigen-selective responses that are restricted to tumor cells and, at the same time, include strategies that restore or enhance the entry, migration and local accumulation of T cells in tumor tissues. Here, we present the current standing of TCR-engineered T cell therapy, discuss and propose procedures to select TCRs as well as strategies to sensitize the tumor to T cell trafficking, and provide a rationale for combination therapies with TCR-engineered T cells.
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                Author and article information

                Contributors
                +31 10 703 48 97 , a.mathijssen@erasmusmc.nl
                Journal
                Br J Cancer
                Br. J. Cancer
                British Journal of Cancer
                Nature Publishing Group UK (London )
                0007-0920
                1532-1827
                26 April 2018
                15 May 2018
                : 118
                : 10
                : 1296-1301
                Affiliations
                [1 ]ISNI 000000040459992X, GRID grid.5645.2, Department of Medical Oncology, , Erasmus MC Cancer Institute, ; Groene Hilledijk 301, Rotterdam, 3008 AE The Netherlands
                [2 ]ISNI 000000040459992X, GRID grid.5645.2, Department of Clinical Chemistry, , Erasmus University Medical Center, ; ‘s-Gravendijkwal 230, Rotterdam, 3015 CE The Netherlands
                [3 ]GRID grid.413711.1, Department of Pulmonology, , Amphia Hospital, ; Molengracht 21, Breda, 4818 CK The Netherlands
                [4 ]ISNI 000000040459992X, GRID grid.5645.2, Department of Pulmonology, , Erasmus University Medical Center, ; ‘s-Gravendijkwal 230, Rotterdam, 3015 CE The Netherlands
                Article
                74
                10.1038/s41416-018-0074-1
                5959881
                29695768
                493a0e52-5588-4cb2-80f8-41324c266c5e
                © Cancer Research UK 2018

                Note: This work is published under the standard license to publish agreement. After 12 months the work will become freely available and the license terms will switch to a Creative Commons Attribution 4.0 International licence (CC BY 4.0).

                History
                : 3 January 2018
                : 9 March 2018
                : 13 March 2018
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                © Cancer Research UK 2018

                Oncology & Radiotherapy
                Oncology & Radiotherapy

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