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      Attenuated Total Reflection-Fourier Transform Infrared Spectroscopy (ATR-FTIR) Combined with Chemometrics Methods for the Classification of Lingzhi Species

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          Abstract

          Due to the existence of Lingzhi adulteration, there is a growing demand for species classification of medicinal mushrooms by various techniques. The objective of this study was to explore a rapid and reliable way to distinguish between different Lingzhi species and compare the influence of data pretreatment methods on the recognition results. To this end, 120 fresh fruiting bodies of Lingzhi were collected, and all of them were analyzed by attenuated total reflection-Fourier transform infrared spectroscopy (ATR-FTIR). Random forest (RF), support vector machine (SVM) and partial least squares discriminant analysis (PLS-DA) classification models were established for raw and pretreated second derivative (SD) spectral matrices to authenticate different Lingzhi species. The results of multivariate statistical analysis indicated that the SD preprocessing method displayed a higher classification ability, which may be attributed to the analysis of powder samples that requires removal of overlapping peaks and baseline shifts. Compared with RF, the results of the SVM and PLS-DA methods were more satisfying, and their accuracies for the test set were both 100%. Among SVM and PLS-DA, the training set and test set accuracy of PLS-DA were both 100%. In conclusion, ATR-FTIR spectroscopy data pretreated by SD combined with PLS-DA is a simple, rapid, non-destructive and relatively inexpensive method to discriminate between mushroom species and provide a good reference to quality assessment.

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                Author and article information

                Contributors
                Role: Academic Editor
                Journal
                Molecules
                Molecules
                molecules
                Molecules
                MDPI
                1420-3049
                13 June 2019
                June 2019
                : 24
                : 12
                : 2210
                Affiliations
                [1 ]College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China; yuanyuanwang325@ 123456163.com (Y.-Y.W.); lijieqing2008@ 123456126.com (J.-Q.L.)
                [2 ]College of Chinese Medicine, Yunnan University of Chinese Medicine, Kunming 650500, China
                Author notes
                [* ]Correspondence: honggaoliu@ 123456126.com (H.-G.L.); boletus@ 123456126.com (Y.-Z.W.); Tel.: +86-871-65221696 (H.-G.L.); +86-871-65033575 (Y.-Z.W.)
                Author information
                https://orcid.org/0000-0001-5376-757X
                Article
                molecules-24-02210
                10.3390/molecules24122210
                6631843
                31200472
                6683a1d1-6b72-41ab-964a-6a87d7726f2c
                © 2019 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 04 May 2019
                : 11 June 2019
                Categories
                Article

                ganoderma,authentication,attenuated total reflection-fourier transform infrared spectroscopy,chemometrics,random forest,support vector machine,partial least squares discriminant analysis

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